Pp3c12_12490V3.1 (Pp3c12_12490)

Aliases : Pp3c12_12490

Description : Pectin lyase-like superfamily protein

Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c12_12490V3.1
Cluster	HCCA: Cluster_32

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene59345.t1	Aspi01Gene59345	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.11G008400.1	Ceric.11G008400	pectin methylesterase & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.19G035800.1	Ceric.19G035800	pectin methylesterase & original description:...	0.01	OrthoFinder output from all 47 species
Ceric.1Z107000.1	Ceric.1Z107000	pectin methylesterase & original description:...	0.02	OrthoFinder output from all 47 species
Len_g04249	No alias	pectin methylesterase & original description: none	0.01	OrthoFinder output from all 47 species
Mp2g01420.1	No alias	pectin methylesterase	0.01	OrthoFinder output from all 47 species
Pp3c16_6660V3.1	Pp3c16_6660	Pectin lyase-like superfamily protein	0.01	OrthoFinder output from all 47 species
Sam_g44288	No alias	pectin methylesterase & original description: none	0.01	OrthoFinder output from all 47 species
Sam_g51650	No alias	pectin methylesterase & original description: none	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	20	182

External Links

No external refs found!