Heatmap: Cluster_32 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
Pp3c10_2160V3.1 (Pp3c10_2160)
4.36 1.08 0.07 - - - - - 1.14 -0.16 - - - - - 2.61 2.75 - - - - - - - - 0.67 - - 0.61 -0.74 - - -1.24 -0.39 - - -0.3 -0.15 - - - - - -0.62 - -0.34 - -2.03
Pp3c10_3630V3.1 (Pp3c10_3630)
5.05 -0.5 -0.18 -1.5 - - - -0.52 1.58 -1.15 - - - - -1.95 -0.05 -0.68 - - - - - - - - 2.65 - - - -4.51 - - - - - - - - - -0.78 - - - - - - - -
Pp3c11_2330V3.1 (Pp3c11_2330)
4.08 0.75 - -2.15 -2.98 - - - - - - - - - -2.36 1.53 -0.23 - - - - -0.85 - 1.55 - 0.18 - -0.72 2.77 -3.48 - - -2.92 - 3.54 - - - -1.05 - - - -1.57 - -1.23 - - -
Pp3c11_3280V3.1 (Pp3c11_3280)
2.83 3.15 1.02 0.26 -3.55 - -0.65 -2.46 0.68 -3.58 - - - -3.45 -3.96 3.95 2.13 0.22 - - - -3.6 - -3.47 - 2.29 - - - -6.96 - - - - - - - - - - - - - - - - - -
Pp3c12_12490V3.1 (Pp3c12_12490)
2.41 - -1.1 1.0 -1.21 0.78 0.81 0.94 1.18 -0.39 -1.15 -1.22 0.06 -1.71 -1.82 - 0.92 1.36 2.2 1.23 1.08 1.29 -0.18 1.28 0.72 0.79 -0.65 -1.29 -1.77 -2.17 -1.63 -0.46 -3.43 - -1.96 -3.55 -1.83 -1.38 -1.28 -3.03 - - -2.54 -1.3 -1.77 -0.51 -2.19 -2.52
Pp3c12_15670V3.1 (Pp3c12_15670)
2.75 - 1.01 -2.39 0.72 0.56 0.22 0.82 - -0.36 - -2.45 -0.32 -2.18 -0.12 - 0.5 -0.66 1.21 -1.47 -0.46 -1.63 - -0.92 -1.79 -1.75 -4.04 -0.88 0.39 1.33 0.07 0.05 0.24 -0.02 -1.02 -0.5 -0.93 0.04 -0.95 0.17 0.58 -0.13 0.16 0.54 0.99 0.6 -0.32 -0.24
Pp3c12_2920V3.1 (Pp3c12_2920)
3.59 - -0.29 - - 1.28 - - - - - - - - - 4.19 2.06 1.31 - - - - - 0.42 - 1.48 - - 0.25 - - - - - 0.09 0.5 - - - - - - - - - - - -
Pp3c13_12830V3.1 (Pp3c13_12830)
3.11 0.2 0.09 1.4 -2.6 -2.81 0.41 0.5 1.19 -2.1 -1.22 0.21 -0.7 -1.53 -1.81 1.47 2.38 0.29 - -1.72 1.02 0.94 - -2.45 0.03 3.09 0.9 - -2.98 -4.48 - - - -3.79 - - - - -2.62 -2.69 -3.06 -1.64 - - -3.81 - - -
Pp3c13_9200V3.1 (Pp3c13_9200)
5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Pp3c14_11209V3.1 (Pp3c14_11209)
3.13 - 1.79 - - 1.14 1.65 1.26 - 0.18 1.35 0.46 -2.39 - -1.19 - 2.07 -1.65 -0.82 -0.93 -0.11 -0.56 - - - 0.69 - - 0.59 -1.05 -1.1 -2.25 -0.1 0.79 - - - -0.06 -1.13 -0.15 - 0.56 -0.65 1.01 - 0.18 -1.59 -1.86
Pp3c14_11920V3.1 (Pp3c14_11920)
4.45 - - - - - - - 4.22 - - - - - - - - 2.9 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Pp3c14_30V3.1 (Pp3c14_30)
5.48 - 1.18 - - - - - - - - - - - -3.3 - - 0.19 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Pp3c15_15449V3.1 (Pp3c15_15449)
4.27 - 3.67 -1.56 - - - - - -3.24 - -1.74 -2.72 -2.27 -3.98 - 1.95 0.71 -0.15 - - - - -2.29 - 0.65 -2.23 -2.13 -2.46 -1.98 -2.89 - -3.1 - - - -2.14 -2.22 -1.74 -0.9 -1.35 0.5 0.12 -1.47 -2.65 -1.42 - -1.08
Pp3c15_19471V3.1 (Pp3c15_19471)
3.86 2.81 1.71 - - - - - 2.37 - - - - - -3.59 2.45 1.46 0.83 - - - - - - - 3.0 - - - - - - - - - - - - - - - - - - - - - -
Pp3c16_21720V3.1 (Pp3c16_21720)
3.9 2.74 - 1.38 -1.26 - - - 2.78 - - - - - - 2.0 2.72 - - - - - - -0.97 - 2.44 - - - - - - - - - - - - - - - - - - - - - -
Pp3c17_19405V3.1 (Pp3c17_19405)
4.01 2.82 - - - - - - - - - - - - - 3.35 3.41 2.0 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Pp3c18_440V3.1 (Pp3c18_440)
4.34 - - 4.63 - - 0.32 - - - - - - - - - - 0.72 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
3.72 - -0.49 -1.69 1.38 2.31 1.51 -0.07 3.54 - - - -1.85 - - -0.81 -1.43 -0.53 - -0.39 - - 2.31 -1.41 -1.91 1.12 - - - -3.29 -2.01 - - - - - - - - - - - - - - - - -
Pp3c19_15959V3.1 (Pp3c19_15959)
4.23 - - -0.33 -2.55 - -1.33 - 1.78 0.58 2.25 2.17 -0.45 - -0.05 - -1.11 - - - - - - 0.33 0.65 0.43 1.25 - -0.05 -1.23 - 0.36 - - - - - 0.0 - - -0.53 - - -1.87 - - - -1.54
Pp3c19_7841V3.1 (Pp3c19_7841)
3.37 1.16 1.49 -0.44 -1.4 -1.97 -1.47 -0.36 1.61 -0.83 -0.08 -1.88 -0.63 - -1.18 2.08 0.41 0.06 1.34 0.23 -2.28 -1.6 0.4 -1.47 0.72 0.37 1.53 -2.18 -1.56 -1.75 - -1.21 -3.05 - - -2.74 - -0.27 - -1.49 -0.64 -0.56 -2.3 -0.41 -0.88 -2.72 - -3.22
Pp3c1_10740V3.1 (Pp3c1_10740)
1.65 -0.54 1.81 -3.24 -5.14 0.09 0.74 0.13 -2.13 -0.46 -2.29 -1.97 -0.58 -0.2 -0.67 0.18 -0.3 1.72 0.45 0.87 0.43 0.68 -4.63 1.36 1.76 0.29 1.68 -1.62 -0.46 -1.49 -0.81 -2.06 -0.78 -1.1 -2.51 0.0 -0.91 -0.86 -1.95 -0.84 -0.53 -0.68 -0.89 0.17 -0.93 -1.13 -1.15 -0.86
Pp3c1_12180V3.1 (Pp3c1_12180)
3.95 4.27 - -0.57 - - - - - - - - - - - 2.28 2.62 - - - - - - - - 0.64 - - - - - - - - - - - - - - - - - - - - - -
Pp3c1_12280V3.1 (Pp3c1_12280)
3.95 4.27 - -0.57 - - - - - - - - - - - 2.28 2.62 - - - - - - - - 0.64 - - - - - - - - - - - - - - - - - - - - - -
Pp3c1_14040V3.1 (Pp3c1_14040)
4.84 2.42 0.46 0.69 0.76 - - - - - - - - - - -0.6 1.76 0.2 - - - - - 1.23 - 0.8 - - - - - - - - - - - - - - - - - - - - - -
Pp3c1_18170V3.1 (Pp3c1_18170)
3.97 4.21 2.11 - - - 1.3 - - - - - - - - - 1.15 - - - - - - - - 2.26 - - - - - - - - - - - - - - - - - - - - - -
Pp3c1_31430V3.1 (Pp3c1_31430)
5.44 - - - - - - - - - - - - - - - - - - - - - - - - 2.17 - - - - - - - - - - - - - - - - - - - - - -
Pp3c21_16921V3.1 (Pp3c21_16921)
2.95 1.21 1.58 1.12 -1.53 2.16 1.85 2.02 1.38 - - -4.16 -4.32 - -2.99 1.17 1.53 1.14 1.28 -0.8 -1.97 -0.56 -1.03 -0.74 - 1.01 - -0.51 -2.58 -3.26 - -4.18 -3.31 -2.65 - -1.6 - -1.99 -1.75 -4.1 - - -4.01 - -3.91 -1.58 -2.8 -1.91
Pp3c21_410V3.1 (Pp3c21_410)
2.92 0.53 -1.86 0.25 -1.06 1.33 1.45 0.4 0.37 -0.72 0.72 -0.57 -0.31 -1.19 -0.55 - -1.86 -0.11 0.92 -2.07 -0.41 -0.62 -1.3 1.36 1.31 -1.28 0.41 -2.06 1.37 -0.95 -1.38 -1.36 -0.23 -0.91 0.29 - 0.98 -2.14 -1.66 -0.61 - -2.17 -0.32 - -1.39 -0.42 - -1.53
Pp3c22_14910V3.1 (Pp3c22_14910)
4.47 4.03 - 1.43 - - - - - - - - - - - - 1.77 - - - - - - - - 1.77 - - - - - - - - - - - - - - - - - - - - - -
Pp3c22_19720V3.1 (Pp3c22_19720)
5.38 - - 2.64 - - - - - - - - - - -2.73 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Pp3c22_4960V3.1 (Pp3c22_4960)
4.06 3.36 -1.94 1.72 -2.4 - - - -1.05 - - - - - - 3.75 1.11 - - - - - - -1.3 - -0.41 - - - - - - - - - - - - - - - - - - - - - -
Pp3c22_5612V3.1 (Pp3c22_5612)
3.16 - 2.01 2.3 0.3 - 0.7 -0.8 - - 1.97 2.75 - - -2.63 - 1.95 0.76 - - -0.73 -2.04 -1.13 -0.29 - 2.27 -0.02 -1.89 - -1.18 - -1.19 -3.03 - - -2.18 - - - - - - - - - -1.16 -1.97 -2.66
Pp3c23_19120V3.1 (Pp3c23_19120)
2.5 - - 3.37 0.29 - 2.6 2.75 - - - - - - - 3.66 2.44 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Pp3c24_20610V3.1 (Pp3c24_20610)
4.65 - - 3.62 - - - - - - - - - - - - 3.41 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Pp3c25_8600V3.1 (Pp3c25_8600)
3.1 - -1.7 0.86 -0.98 1.82 1.59 -0.77 2.46 -0.09 -1.18 -2.39 -0.03 - 0.63 - 1.75 1.2 - 0.54 -1.79 0.01 -0.69 -1.11 -0.54 0.45 -1.27 -0.39 0.06 -1.9 -2.1 -1.33 -2.13 -0.6 -2.45 -2.03 - -1.04 - -0.53 -0.73 -1.9 - -1.52 -1.14 -2.23 -0.45 -1.65
Pp3c26_3180V3.1 (Pp3c26_3180)
4.76 - - 1.49 - - - - 1.53 - - - - - - - 3.58 - - - - - - - - 1.69 - - - - - - - - - - - - - - - - - - - - - -
Pp3c26_6600V3.1 (Pp3c26_6600)
3.92 1.82 1.3 2.21 -2.53 - - - 0.18 - - - - - -4.5 4.03 0.76 - - - - - - -1.25 - 1.29 - - - - - - - - - - - - - - - - - - - - - -
Pp3c2_3621V3.1 (Pp3c2_3621)
2.57 -1.56 0.5 -2.54 -2.95 1.5 1.38 0.38 0.59 -0.12 -2.23 -1.25 0.25 -0.13 -0.71 1.09 0.02 -0.72 1.58 1.4 1.01 0.73 -2.76 -2.18 0.23 0.05 1.13 -0.56 -2.24 -0.51 -0.94 -1.36 -1.65 -1.8 -2.06 -4.31 -1.24 -0.44 -1.95 -1.8 -0.06 -0.91 -0.96 -1.42 -1.15 -0.48 -1.21 -0.77
Pp3c3_15860V3.1 (Pp3c3_15860)
3.57 2.1 1.67 -0.72 -4.36 -0.17 0.02 -0.0 3.32 - -2.34 -2.72 - -2.17 -5.85 0.97 -0.03 0.85 - -1.24 -1.47 -0.85 -1.85 1.44 2.12 -0.39 -3.22 - - -5.52 - - - - - - - -3.39 - - - - - - - - - -3.97
Pp3c3_17640V3.1 (Pp3c3_17640)
3.35 - - 1.05 - - 3.46 - - - - - - - - 4.56 - 0.2 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Pp3c3_19475V3.1 (Pp3c3_19475)
2.85 -1.14 - 0.38 - - - -1.53 - -0.92 -0.1 0.81 0.68 0.34 0.67 3.83 1.0 0.42 - -2.43 -2.55 1.16 -1.96 -2.87 -0.22 1.94 0.07 - -2.41 -2.24 -2.72 -3.17 -1.91 -2.22 -2.19 - -1.59 -2.46 -0.55 -1.76 -1.19 -1.13 -3.0 - -2.9 -1.43 -2.8 -2.36
Pp3c3_25810V3.1 (Pp3c3_25810)
3.99 - - -2.88 -0.64 1.59 1.72 2.27 3.53 - - - - - -2.51 - -1.3 0.86 - - - - - -2.43 2.43 -0.96 -2.83 - - - - - - - - - - - - - - - - - - - - -
Pp3c3_29083V3.1 (Pp3c3_29083)
4.72 2.43 - - - - - - - - - - - - - - 3.61 - - - - - - - - 2.03 - - - - - - - - - - - - - - - - - - - - - -
Pp3c3_36980V3.1 (Pp3c3_36980)
5.09 - 1.87 - -0.95 - - - - - - - - - - 3.16 -0.3 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Pp3c3_5018V3.1 (Pp3c3_5018)
3.44 1.18 -2.96 -0.32 1.04 0.64 -1.23 -1.03 - -0.92 -1.35 -0.73 -0.39 -0.62 -1.53 - 1.56 0.3 1.96 0.69 - 1.05 - 2.01 1.45 1.3 -0.37 - -2.54 -2.57 -3.22 - -3.41 -2.71 -2.66 - - -0.95 -1.54 -1.58 - -0.23 -0.55 - -1.92 -1.5 - -2.32
Pp3c3_5204V3.1 (Pp3c3_5204)
3.78 -0.31 2.25 -0.03 -0.72 - -0.02 - 1.76 -2.46 0.79 1.16 -1.17 -3.01 -0.68 3.55 -1.36 -3.88 - - - - - - -0.63 0.02 -0.53 - -0.41 -2.22 - -3.47 -3.84 - -0.65 -3.1 - - - -2.39 - -2.95 - -2.36 - -2.82 - -1.55
3.66 2.11 -0.27 - - - - - - - - - - - - 4.02 2.37 - - - - - - - - 3.15 - - - - - - - - - - - - - - - - - - - - - -
Pp3c4_29630V3.1 (Pp3c4_29630)
3.79 1.11 1.97 1.09 -3.25 -2.95 -2.56 -4.46 - 0.02 -4.69 -4.98 0.33 -0.81 0.01 0.9 1.08 -3.4 - -4.26 - -2.72 - -3.24 -2.26 0.98 -1.79 - - -1.32 -5.3 -2.88 - - - - - -1.16 -4.15 -3.1 0.79 2.45 -0.16 -3.52 - -1.11 -1.51 2.2
Pp3c5_12460V3.1 (Pp3c5_12460)
3.79 2.27 1.31 4.12 - - - - - - - - - - -3.62 0.82 2.11 -1.38 - - - - - -2.14 - 1.45 - - - - - - - - - - - - - - - - - - - - - -
Pp3c6_15720V3.1 (EMB2780)
4.79 3.73 0.51 0.98 -2.87 - - - -0.86 - - - - - - -3.17 0.43 - - - - - - -3.63 - 0.51 - - - -7.29 - - - - - - - - - - - - - - - - - -
Pp3c6_15780V3.1 (Pp3c6_15780)
4.35 - - -1.45 - 0.47 - 1.17 -1.4 -0.54 - - - 0.74 -3.33 - - - - - - - 1.33 - - 2.14 - - - -1.09 - - - -1.34 - - - - - - 1.78 2.5 -1.29 - -1.19 - - 1.6
Pp3c6_20010V3.1 (Pp3c6_20010)
3.49 2.2 -0.25 1.78 -1.92 1.85 1.53 0.42 - -3.36 - - - - -3.78 - 0.27 0.45 2.28 0.71 1.01 2.39 -0.99 -1.41 0.27 -0.44 - - - - - - - - - - - - - - - - - - - -2.05 - -2.31
Pp3c6_4598V3.1 (Pp3c6_4598)
3.15 -0.39 -0.08 -0.51 -4.34 - - -0.19 2.86 - -0.8 -0.89 - - -3.19 3.94 2.14 -2.17 - -1.11 - -3.12 - -1.88 -0.71 -2.24 -3.53 1.13 -0.89 -1.23 -3.26 -3.42 - -3.48 -1.11 -3.26 - - - -0.55 -2.75 -1.99 -3.26 - - - -1.9 -3.6
Pp3c7_4358V3.1 (Pp3c7_4358)
3.01 1.44 0.89 -0.35 -2.04 -0.33 - -1.81 - -0.78 -1.45 -1.08 -2.7 - -1.22 - 0.38 2.5 -0.57 2.24 1.13 2.07 -0.25 1.24 0.42 -1.41 -4.1 -1.79 -3.05 -0.84 -1.87 -2.85 -2.86 -1.96 -4.01 -2.03 -2.33 -0.29 -0.72 -0.85 -2.77 - -2.37 0.25 -1.36 -0.55 -0.78 -2.8
Pp3c8_14410V3.1 (Pp3c8_14410)
3.85 - - - - - 2.7 - - - - - - - - 4.04 2.41 - - - - - - - - 2.42 - - - - - - - - - - - - - - - - - - - - - -
Pp3c8_15700V3.1 (Pp3c8_15700)
1.58 -1.12 1.59 -1.05 -1.11 0.77 0.14 1.61 0.03 0.07 1.38 2.04 0.08 -0.11 -0.31 -5.02 -0.29 0.36 -0.79 0.31 -1.57 -0.74 -1.62 -2.41 -0.7 -1.1 -0.14 -0.14 -0.97 -1.05 -1.05 0.83 -0.27 -0.6 -0.9 -0.16 -0.09 -0.13 -1.22 -0.33 -1.23 -1.39 -0.34 0.05 -0.03 -0.0 -0.96 -1.07
Pp3c8_7549V3.1 (Pp3c8_7549)
2.46 1.39 0.35 1.08 -0.44 0.81 0.66 0.24 0.99 -0.33 -3.33 -4.86 -0.25 1.37 -0.05 2.49 0.81 -0.9 -0.83 -0.05 -1.68 -2.89 -0.09 -4.93 -2.46 -1.8 -2.99 -1.5 -1.78 0.06 -1.79 -3.26 -1.01 0.13 -1.04 -2.87 -2.25 -0.28 -1.81 -0.0 -0.9 -0.81 -0.13 0.28 -0.38 -0.17 -0.74 -1.31
4.4 -0.75 -1.2 -3.77 -3.59 -0.05 - 0.86 2.74 0.15 - - -0.29 1.03 -2.6 0.91 -0.64 -2.13 -1.36 -3.05 - - - - - 0.61 - - -3.66 -0.52 -3.33 -3.79 -0.5 -0.71 - -3.04 - -1.6 -0.36 -0.53 - -3.26 0.26 -2.16 -2.03 0.24 -2.41 -4.26
Pp3c9_18790V3.1 (Pp3c9_18790)
4.9 - 3.52 - - - - - - - - - - - - - 2.72 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.