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  5. Pp3c11_3280V3.1

Pp3c11_3280V3.1 (Pp3c11_3280)


Aliases : Pp3c11_3280

Description : disease resistance protein (TIR-NBS-LRR class)


Gene families : OG0001630 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001630_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c11_3280V3.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Pp3c10_16940V3.1 Pp3c10_16940 transmembrane receptors;ATP binding 0.03 OrthoFinder output from all 47 species
Pp3c14_13230V3.1 Pp3c14_13230 disease resistance protein (TIR-NBS-LRR class), putative 0.02 OrthoFinder output from all 47 species
Pp3c18_22270V3.1 Pp3c18_22270 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c9_24930V3.1 Pp3c9_24930 No annotation 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 2 119
IPR001611 Leu-rich_rpt 338 359
IPR001611 Leu-rich_rpt 361 383
No external refs found!