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Aliases : Pp3c10_24230
Description : time for coffee
Gene families : OG0000917 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000917_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pp3c10_24230V3.1 | |
| Cluster | HCCA: Cluster_72 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G22380 | TIC | time for coffee | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g011963 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g109818 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g12419 | No alias | regulatory protein *(TIC) of circadian clock & original... | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene29699.t1 | Aspi01Gene29699 | regulatory protein *(TIC) of circadian clock & original... | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0015.g013810 | No alias | regulatory protein *(TIC) of circadian clock & original... | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0476.g073010 | No alias | regulatory protein *(TIC) of circadian clock & original... | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g72970 | No alias | regulatory protein *(TIC) of circadian clock & original... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_04775 | No alias | circadian clock regulator (TIC) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_10972 | No alias | circadian clock regulator (TIC) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_35694 | No alias | circadian clock regulator (TIC) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g30742 | No alias | regulatory protein *(TIC) of circadian clock & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g25848 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g46219 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |