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  5. Pp3c10_17530V3.1

Pp3c10_17530V3.1 (Pp3c10_17530)


Aliases : Pp3c10_17530

Description : RING/U-box superfamily protein


Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c10_17530V3.1
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Ceric.32G073100.1 Ceric.32G073100 E3 ubiquitin ligase *(RMA/MUSE) & original description:... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000545.1 No alias No description available 0.01 OrthoFinder output from all 47 species
Dde_g18993 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g05375 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01009643001 No alias No description available 0.01 OrthoFinder output from all 47 species
Lfl_g05941 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38674 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g19950 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g29641 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!