Pp3c10_11910V3.1 (Pp3c10_11910)

Aliases : Pp3c10_11910

Description : Integrase-type DNA-binding superfamily protein

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c10_11910V3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00058p00066390	RAP2.11,...	External stimuli response.biotic...	0.01	OrthoFinder output from all 47 species
AT3G15210	ATERF4, RAP2.5,...	ethylene responsive element binding factor 4	0.01	OrthoFinder output from all 47 species
AT4G11140	CRF1	cytokinin response factor 1	0.02	OrthoFinder output from all 47 species
AT4G31060	No alias	Integrase-type DNA-binding superfamily protein	0.02	OrthoFinder output from all 47 species
AT4G34410	RRTF1	redox responsive transcription factor 1	0.01	OrthoFinder output from all 47 species
Adi_g022278	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Als_g10396	AtERF48, DREB2C	subgroup ERF-IV/DREB2 transcription factor & original...	0.01	OrthoFinder output from all 47 species
Als_g10439	No alias	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Als_g11814	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aop_g05459	No alias	subgroup ERF-V transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aop_g10151	ERF7, ATERF7, ATERF-7	subgroup ERF-VIII transcription factor & original...	0.01	OrthoFinder output from all 47 species
Aop_g38332	TINY2	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ceric.30G046300.1	Ceric.30G046300	not classified & original description: pacid=50608225...	0.02	OrthoFinder output from all 47 species
Ceric.30G046400.1	RAP2.1, Ceric.30G046400	not classified & original description: pacid=50608761...	0.02	OrthoFinder output from all 47 species
Cre07.g353500	ATERF-9, ERF9, ATERF9	No description available	0.02	OrthoFinder output from all 47 species
Cre08.g364400	RAP2.2	No description available	0.01	OrthoFinder output from all 47 species
Dac_g32017	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.01	OrthoFinder output from all 47 species
Dcu_g16200	DEAR4, RAP2.10	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g33863	No alias	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Dcu_g36822	ATERF-9, ERF9, ATERF9	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Dde_g03884	CRF3	subgroup ERF-VI transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Dde_g25479	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.01	OrthoFinder output from all 47 species
Dde_g31465	No alias	subgroup ERF-X transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Gb_26739	DREB26	transcription factor (DREB)	0.01	OrthoFinder output from all 47 species
LOC_Os02g09650.1	ATERF3, ERF3,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
LOC_Os06g47590.1	ATERF3, ERF3,...	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os09g20350.1	RAP2.4, LOC_Os09g20350	transcription factor (DREB)	0.01	OrthoFinder output from all 47 species
Len_g13845	TINY2	subgroup ERF-III transcription factor & original...	0.01	OrthoFinder output from all 47 species
Lfl_g04609	ORA47	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_98464g0010	RAP2.4	Ethylene-responsive transcription factor RAP2-4...	0.02	OrthoFinder output from all 47 species
Msp_g09157	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.01	OrthoFinder output from all 47 species
Nbi_g09486	tny	subgroup ERF-III transcription factor & original...	0.01	OrthoFinder output from all 47 species
Nbi_g14223	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.01	OrthoFinder output from all 47 species
Nbi_g36821	DEAR1, CEJ1, ATERF#011	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ore_g02257	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g12543	ATERF8, ATERF-8, ERF8	subgroup ERF-VIII transcription factor & original...	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004889	No alias	not classified & original description: CDS=1-627	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013094	No alias	subgroup ERF-V transcription factor & original...	0.02	OrthoFinder output from all 47 species
Solyc12g008350.3.1	TINY2, Solyc12g008350	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Spa_g04537	ERF72, EBP, ATEBP, RAP2.3	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Tin_g03837	ATERF-9, ERF9, ATERF9	subgroup ERF-VIII transcription factor & original...	0.01	OrthoFinder output from all 47 species
Zm00001e013927_P001	ATERF3, ERF3,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Zm00001e025064_P001	ATERF3, ERF3,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Zm00001e033965_P001	RAP2.4, Zm00001e033965	transcription factor (DREB)	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	122	171

External Links

No external refs found!

Pp3c10_11910V3.1 (Pp3c10_11910)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation