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  5. Mp8g15410.1

Mp8g15410.1


Description : RING-v-class E3 ligase


Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g15410.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AT1G02610 No alias RING/FYVE/PHD zinc finger superfamily protein 0.07 OrthoFinder output from all 47 species
AT5G62460 No alias RING/FYVE/PHD zinc finger superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g013103 No alias E3 ubiquitin ligase & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g050586 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056932 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g074839 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09334 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g01768 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06275 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40952 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g46783 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03403.t1 Aspi01Gene03403 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0591.g078731 No alias not classified & original description: CDS=293-1048 0.02 OrthoFinder output from all 47 species
Azfi_s1957.g108376 No alias E3 ubiquitin ligase & original description: CDS=1-984 0.02 OrthoFinder output from all 47 species
Ceric.11G058300.1 Ceric.11G058300 E3 ubiquitin ligase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.39G041400.1 Ceric.39G041400 E3 ubiquitin ligase & original description:... 0.03 OrthoFinder output from all 47 species
Cre09.g400738 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Dac_g17057 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06352 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g28103 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g47525 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06898 PIT1 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24961 No alias E3 ubiquitin ligase & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g16213 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032602001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Gb_37740 No alias RING-v-class E3 ligase 0.04 OrthoFinder output from all 47 species
Msp_g21354 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44326 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g00485 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g23717 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12301 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60879 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28055 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g010880.3.1 Solyc01g010880 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc01g079530.4.1 Solyc01g079530 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc02g091230.4.1 Solyc02g091230 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Tin_g10556 No alias E3 ubiquiTin ligase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 100 145
IPR022143 DUF3675 152 271
No external refs found!