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  5. Mp8g15260.1

Mp8g15260.1 (VAM3, ATVAM3,...)


Aliases : VAM3, ATVAM3, ATSYP22, SGR3, SYP22

Description : SYP2-group Qa-type SNARE component


Gene families : OG0001469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g15260.1

Target Alias Description ECC score Gene Family Method Actions
Ceric.21G031200.1 VAM3, ATVAM3,... Qa-type SYP2-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Len_g04623 SYP21, ATSYP21,... Qa-type SYP2-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
MA_179458g0010 VAM3, ATVAM3,... SYP2-group Qa-type SNARE component 0.04 OrthoFinder output from all 47 species
Msp_g01466 VAM3, ATVAM3,... Qa-type SYP2-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Nbi_g08860 VAM3, ATVAM3,... Qa-type SYP2-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Sam_g12395 No alias Qa-type SYP2-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Sam_g29482 No alias Qa-type SYP2-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 29 128
IPR000727 T_SNARE_dom 216 267
No external refs found!