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Description : CORVET-specific component VPS8 of HOPS/CORVET membrane tethering complexes
Gene families : OG0004817 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004817_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp8g08230.1 | |
| Cluster | HCCA: Cluster_10 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00100p00112150 | evm_27.TU.AmTr_v1... | Vesicle trafficking.target membrane... | 0.04 | OrthoFinder output from all 47 species | |
| AT4G00800 | No alias | transducin family protein / WD-40 repeat family protein | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g104722 | No alias | CORVET-specific component *(VPS8) of HOPS/CORVET... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g14975 | No alias | CORVET-specific component *(VPS8) of HOPS/CORVET... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g12813 | No alias | CORVET-specific component *(VPS8) of HOPS/CORVET... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g32080 | No alias | CORVET-specific component *(VPS8) of HOPS/CORVET... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g31629 | No alias | CORVET-specific component *(VPS8) of HOPS/CORVET... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0580.g078297 | No alias | CORVET-specific component *(VPS8) of HOPS/CORVET... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.08G032600.1 | Ceric.08G032600 | CORVET-specific component *(VPS8) of HOPS/CORVET... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g33746 | No alias | CORVET-specific component *(VPS8) of HOPS/CORVET... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g04151 | No alias | CORVET-specific component *(VPS8) of HOPS/CORVET... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01027438001 | No alias | Vesicle trafficking.target membrane... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_27586 | No alias | CORVET-specific component VPS8 of HOPS/CORVET membrane... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g19136 | No alias | CORVET-specific component *(VPS8) of HOPS/CORVET... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g29102 | No alias | CORVET-specific component *(VPS8) of HOPS/CORVET... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10432728g0020 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0195.g025456 | No alias | CORVET-specific component *(VPS8) of HOPS/CORVET... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g11618 | No alias | CORVET-specific component *(VPS8) of HOPS/CORVET... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g044610.3.1 | Solyc05g044610 | CORVET-specific component VPS8 of HOPS/CORVET membrane... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013515_P001 | Zm00001e013515 | CORVET-specific component VPS8 of HOPS/CORVET membrane... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006479 | protein methylation | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| BP | GO:0008213 | protein alkylation | IEP | HCCA |
| MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016571 | histone methylation | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | HCCA |
| MF | GO:0018024 | histone lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034968 | histone lysine methylation | IEP | HCCA |
| MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| CC | GO:0071203 | WASH complex | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR025941 | Vps8_central_dom | 1177 | 1362 |
| No external refs found! |