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Description : transcription factor (Trihelix)
Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp8g08100.1 | |
| Cluster | HCCA: Cluster_39 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00041p00147950 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.Trihelix... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G33240 | AT-GTL1, GTL1, AT-GTL2 | GT-2-like 1 | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g08051 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g59070 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0305.g063935 | AT-GT2, GT2 | not classified & original description: CDS=293-1360 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g36900 | AT-GTL1, GTL1, AT-GTL2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.35G006300.1 | Ceric.35G006300 | Trihelix-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g26470 | AT-GT2, GT2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g04858 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g12622 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01019722001 | No alias | RNA biosynthesis.transcriptional activation.Trihelix... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_38519 | No alias | transcription factor (Trihelix) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g02240.1 | AT-GT2, GT2,... | transcription factor (Trihelix) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g45750.1 | LOC_Os04g45750 | transcription factor (Trihelix) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g37240.4 | LOC_Os10g37240 | Trihelix transcription factor GT-2 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g03878 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g19098 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10433499g0020 | AT-GT2, GT2 | transcription factor (Trihelix) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g06014 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g11531 | AT-GT2, GT2 | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo85122 | No alias | Trihelix transcription factor GT-2 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g071360.4.1 | Solyc04g071360 | transcription factor (Trihelix) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g24159 | No alias | Trihelix-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| BP | GO:0005984 | disaccharide metabolic process | IEP | HCCA |
| BP | GO:0005991 | trehalose metabolic process | IEP | HCCA |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | HCCA |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |