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  5. Mp8g03110.1

Mp8g03110.1 (AXR6, ATCUL1, CUL1)


Aliases : AXR6, ATCUL1, CUL1

Description : scaffold component CUL1/CUL2 of SKP1-CUL1-FBX (SCF) E3 ligase complexes


Gene families : OG0001888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001888_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g03110.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Adi_g087062 AXR6, ATCUL1, CUL1 scaffold component *(CUL1) of SCF E3 ubiquitin ligase... 0.06 OrthoFinder output from all 47 species
Adi_g116543 AXR6, ATCUL1, CUL1 scaffold component *(CUL1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Als_g52906 AXR6, ATCUL1, CUL1 scaffold component *(CUL1) of SCF E3 ubiquitin ligase... 0.06 OrthoFinder output from all 47 species
Aob_g06725 AXR6, ATCUL1, CUL1 scaffold component *(CUL1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aop_g01815 AXR6, ATCUL1, CUL1 scaffold component *(CUL1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Cba_g11839 AXR6, ATCUL1, CUL1 scaffold component *(CUL1) of SCF E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Ceric.27G015900.1 AXR6, ATCUL1,... scaffold component *(CUL1) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ceric.28G004800.1 AXR6, ATCUL1,... scaffold component *(CUL1) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020563.191 AXR6, ATCUL1, CUL1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Cre17.g734400 AXR6, ATCUL1, CUL1 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Dcu_g04834 AXR6, ATCUL1, CUL1 scaffold component *(CUL1) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Dde_g02972 AXR6, ATCUL1, CUL1 scaffold component *(CUL1) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
GSVIVT01010966001 AXR6, ATCUL1, CUL1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01017738001 AXR6, ATCUL1, CUL1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Gb_00939 AXR6, ATCUL1, CUL1 scaffold component CUL1/CUL2 of SKP1-CUL1-FBX (SCF) E3... 0.03 OrthoFinder output from all 47 species
Gb_16689 AXR6, ATCUL1, CUL1 scaffold component CUL1/CUL2 of SKP1-CUL1-FBX (SCF) E3... 0.04 OrthoFinder output from all 47 species
Gb_23722 AXR6, ATCUL1, CUL1 scaffold component CUL1/CUL2 of SKP1-CUL1-FBX (SCF) E3... 0.02 OrthoFinder output from all 47 species
Len_g59431 AXR6, ATCUL1, CUL1 scaffold component *(CUL1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Lfl_g06203 AXR6, ATCUL1, CUL1 scaffold component *(CUL1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ore_g30275 AXR6, ATCUL1, CUL1 scaffold component *(CUL1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pir_g01372 AXR6, ATCUL1, CUL1 scaffold component *(CUL1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sam_g12468 No alias scaffold component *(CUL1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Smo173394 AXR6, ATCUL1, CUL1 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Solyc01g067100.4.1 AXR6, ATCUL1,... scaffold component CUL1/CUL2 of SKP1-CUL1-FBX (SCF) E3... 0.03 OrthoFinder output from all 47 species
Solyc09g074680.3.1 AXR6, ATCUL1,... scaffold component CUL1/CUL2 of SKP1-CUL1-FBX (SCF) E3... 0.02 OrthoFinder output from all 47 species
Spa_g49448 AXR6, ATCUL1, CUL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e027502_P001 AXR6, ATCUL1,... scaffold component CUL1/CUL2 of SKP1-CUL1-FBX (SCF) E3... 0.09 OrthoFinder output from all 47 species
Zm00001e040431_P004 AXR6, ATCUL1,... scaffold component CUL1/CUL2 of SKP1-CUL1-FBX (SCF) E3... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
MF GO:0031625 ubiquitin protein ligase binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008104 protein localization IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR019559 Cullin_neddylation_domain 675 737
IPR001373 Cullin_N 25 648
No external refs found!