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  5. Mp8g01530.1

Mp8g01530.1


Description : Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana (sp|q9sai2|caf1f_arath : 432.0)


Gene families : OG0000833 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000833_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g01530.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Als_g00760 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.03 OrthoFinder output from all 47 species
Aop_g01690 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.03 OrthoFinder output from all 47 species
Aspi01Gene25229.t1 Aspi01Gene25229 deadenylase component *(CAF1) of mRNA deadenylation... 0.02 OrthoFinder output from all 47 species
Azfi_s0035.g025723 No alias not classified & original description: CDS=1-1119 0.03 OrthoFinder output from all 47 species
Ceric.05G056100.1 Ceric.05G056100 deadenylase component *(CAF1) of mRNA deadenylation... 0.03 OrthoFinder output from all 47 species
Ehy_g00624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03366 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.02 OrthoFinder output from all 47 species
Len_g17479 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.02 OrthoFinder output from all 47 species
Len_g20084 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.02 OrthoFinder output from all 47 species
Lfl_g00761 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.02 OrthoFinder output from all 47 species
Msp_g09969 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.02 OrthoFinder output from all 47 species
Ore_g08887 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.03 OrthoFinder output from all 47 species
Ore_g13769 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.03 OrthoFinder output from all 47 species
Pir_g45338 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.02 OrthoFinder output from all 47 species
Pnu_g17936 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.02 OrthoFinder output from all 47 species
Ppi_g14365 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006359 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.03 OrthoFinder output from all 47 species
Spa_g11164 No alias deadenylase component *(CAF1) of mRNA deadenylation... 0.02 OrthoFinder output from all 47 species
Zm00001e022474_P001 Zm00001e022474 Probable CCR4-associated factor 1 homolog 6... 0.02 OrthoFinder output from all 47 species
Zm00001e023692_P002 Zm00001e023692 Probable CCR4-associated factor 1 homolog 7... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006941 RNase_CAF1 15 136
IPR006941 RNase_CAF1 158 243
No external refs found!