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  5. Mp8g01420.1

Mp8g01420.1 (ATMBD9, MBD9)


Aliases : ATMBD9, MBD9

Description : Methyl-CpG-binding domain-containing protein 9 OS=Arabidopsis thaliana (sp|q9sgh2|mbd9_arath : 335.0)


Gene families : OG0006711 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006711_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g01420.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00267510 ATMBD9, MBD9,... Methyl-CpG-binding domain-containing protein 9... 0.04 OrthoFinder output from all 47 species
AT3G01460 ATMBD9, MBD9 methyl-CPG-binding domain 9 0.08 OrthoFinder output from all 47 species
Adi_g011991 ATMBD9, MBD9 component *(MBD9) of SWR1 chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Aev_g28617 ATMBD9, MBD9 component *(MBD9) of SWR1 chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Ala_g17040 ATMBD9, MBD9 component *(MBD9) of SWR1 chromatin remodeling complex &... 0.04 OrthoFinder output from all 47 species
Als_g03908 ATMBD9, MBD9 component *(MBD9) of SWR1 chromatin remodeling complex &... 0.04 OrthoFinder output from all 47 species
Aop_g10631 ATMBD9, MBD9 component *(MBD9) of SWR1 chromatin remodeling complex &... 0.05 OrthoFinder output from all 47 species
Cba_g07789 ATMBD9, MBD9 component *(MBD9) of SWR1 chromatin remodeling complex &... 0.01 OrthoFinder output from all 47 species
Ceric.19G068300.1 ATMBD9, MBD9,... component *(MBD9) of SWR1 chromatin remodeling complex &... 0.07 OrthoFinder output from all 47 species
Dac_g15509 ATMBD9, MBD9 component *(MBD9) of SWR1 chromatin remodeling complex &... 0.02 OrthoFinder output from all 47 species
Dcu_g37526 ATMBD9, MBD9 component *(MBD9) of SWR1 chromatin remodeling complex &... 0.04 OrthoFinder output from all 47 species
Dde_g09867 ATMBD9, MBD9 component *(MBD9) of SWR1 chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g19882 ATMBD9, MBD9 component *(MBD9) of SWR1 chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01020232001 ATMBD9, MBD9 Methyl-CpG-binding domain-containing protein 9... 0.02 OrthoFinder output from all 47 species
Gb_22434 ATMBD9, MBD9 Methyl-CpG-binding domain-containing protein 9... 0.03 OrthoFinder output from all 47 species
MA_10435977g0020 ATMBD9, MBD9 Methyl-CpG-binding domain-containing protein 9... 0.05 OrthoFinder output from all 47 species
MA_41907g0010 ATMBD9, MBD9 Methyl-CpG-binding domain-containing protein 9... 0.08 OrthoFinder output from all 47 species
MA_41907g0020 ATMBD9, MBD9 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g15536 ATMBD9, MBD9 component *(MBD9) of SWR1 chromatin remodeling complex &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013974 ATMBD9, MBD9 component *(MBD9) of SWR1 chromatin remodeling complex &... 0.04 OrthoFinder output from all 47 species
Sam_g18047 No alias component *(MBD9) of SWR1 chromatin remodeling complex &... 0.02 OrthoFinder output from all 47 species
Solyc05g005640.4.1 ATMBD9, MBD9,... Methyl-CpG-binding domain-containing protein 9... 0.05 OrthoFinder output from all 47 species
Spa_g49760 ATMBD9, MBD9 component *(MBD9) of SWR1 chromatin remodeling complex &... 0.04 OrthoFinder output from all 47 species
Tin_g01305 ATMBD9, MBD9 component *(MBD9) of SWR1 chromaTin remodeling complex &... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR028941 WHIM2_dom 2288 2435
IPR019787 Znf_PHD-finger 1858 1903
IPR019787 Znf_PHD-finger 171 218
IPR001739 Methyl_CpG_DNA-bd 784 826
IPR018501 DDT_dom 1255 1294
IPR028942 WHIM1_dom 1960 2001
No external refs found!