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  5. Mp7g19200.1

Mp7g19200.1


Description : no hits & (original description: none)


Gene families : OG0002651 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002651_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g19200.1
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00195320 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT1G02990 No alias BEST Arabidopsis thaliana protein match is: CW-type Zinc... 0.06 OrthoFinder output from all 47 species
AT3G62900 No alias CW-type Zinc Finger 0.05 OrthoFinder output from all 47 species
Adi_g114343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37199 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43022 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g21202 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g39374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04573.t1 Aspi01Gene04573 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g32046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G045900.1 Ceric.34G045900 not classified & original description: pacid=50623623... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021462.3 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g09109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g03192 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04456 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010964001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01017765001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_16688 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Gb_29110 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g22580.2 LOC_Os03g22580 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g47360.1 LOC_Os07g47360 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g18072 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g38313 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g15187 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g36365 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07029 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16843 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03272 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014631 No alias not classified & original description: CDS=1-3282 0.02 OrthoFinder output from all 47 species
Sam_g16207 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo426541 No alias No description available 0.05 OrthoFinder output from all 47 species
Solyc01g067600.3.1 Solyc01g067600 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc09g074670.4.1 Solyc09g074670 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g12838 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02902 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e010934_P001 Zm00001e010934 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e035816_P001 Zm00001e035816 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011124 Znf_CW 554 599
No external refs found!