1. Home
  2. Species
  3. Marchantia polymorpha
  4. Sequence
  5. Mp7g16780.1

Mp7g16780.1 (SDG30, ATX2)


Aliases : SDG30, ATX2

Description : Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa subsp. japonica (sp|q6k431|trx1_orysj : 850.0)


Gene families : OG0004303 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004303_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g16780.1

Target Alias Description ECC score Gene Family Method Actions
AT1G05830 SDG30, ATX2 trithorax-like protein 2 0.06 OrthoFinder output from all 47 species
Adi_g013424 ATX1, SDG27 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Aev_g04886 ATX1, SDG27 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Aev_g32400 ATX1, SDG27 class-III histone methyltransferase *(Trx) & original... 0.05 OrthoFinder output from all 47 species
Ala_g02683 ATX1, SDG27 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Als_g15203 SDG30, ATX2 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Als_g32921 ATX1, SDG27 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Aob_g29671 ATX1, SDG27 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene13213.t1 SDG30, ATX2,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13214.t1 SDG30, ATX2,... class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Cba_g38525 SDG30, ATX2 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Ceric.20G024500.1 SDG30, ATX2,... class-III histone methyltransferase *(Trx) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g05840 ATX1, SDG27 class-III histone methyltransferase *(Trx) & original... 0.05 OrthoFinder output from all 47 species
Ehy_g21792 ATX1, SDG27 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Gb_04715 No alias Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os09g04890.1 SDG30, ATX2,... Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Lfl_g35891 SDG30, ATX2 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Msp_g13971 SDG30, ATX2 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Pir_g12237 ATX1, SDG27 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Pir_g35526 ATX1, SDG27 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g22261 SDG30, ATX2 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Solyc09g098260.3.1 SDG30, ATX2,... Histone-lysine N-methyltransferase ATX2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g09107 ATX1, SDG27 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Tin_g22080 SDG30, ATX2 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e033644_P001 SDG30, ATX2,... class III/Trithorax histone methyltransferase component... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 1796 1902
IPR003888 FYrich_N 1301 1351
IPR003889 FYrich_C 1361 1441
IPR000313 PWWP_dom 1150 1238
No external refs found!