Aliases : DCL1, CAF, EMB76, SIN1, ATDCL1, EMB60, SUS1, ASU1
Description : Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica (sp|q8lmr2|dcl1_orysj : 405.0)
Gene families : OG0000378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000378_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Mp7g16380.1 | |
Cluster | HCCA: Cluster_2 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aspi01Gene32280.t1 | ATDCL2, DCL2,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0335.g065527 | DCL1, CAF,... | not classified & original description: CDS=85-2319 | 0.02 | OrthoFinder output from all 47 species | |
Dde_g30445 | DCL1, CAF,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Gb_33864 | DCL1, CAF,... | ribonuclease (RTL2) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g38740.1 | ATDCL2, DCL2,... | Endoribonuclease Dicer homolog 2a OS=Oryza sativa subsp.... | 0.03 | OrthoFinder output from all 47 species | |
MA_10434435g0010 | DCL1, CAF,... | Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
MA_159147g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g45378 | DCL1, CAF,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc05g024210.1.1 | ATRTL1, RTL1,... | Ribonuclease 3-like protein 3 OS=Oryza sativa subsp.... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004525 | ribonuclease III activity | IEA | Interproscan |
BP | GO:0006396 | RNA processing | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
No external refs found! |