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  5. Mp7g14760.1

Mp7g14760.1


Description : pre-mRNA splicing factor (SPF31)


Gene families : OG0006204 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006204_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g14760.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Cre12.g557950 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.03 OrthoFinder output from all 47 species
Nbi_g12278 No alias pre-mRNA splicing factor *(SPF31) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g071930.2.1 Solyc11g071930 pre-mRNA splicing factor (SPF31) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 40 96
No external refs found!