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Description : PHD finger transcription factor
Gene families : OG0000402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000402_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00039p00203500 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.PHD finger... | 0.02 | OrthoFinder output from all 47 species | |
| AT4G14920 | No alias | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g110799 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aev_g13062 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g16047 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g20182 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g20272 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g20441 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g23026 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g32072 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g10962 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g29724 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g07565 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g13559 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene53152.t1 | Aspi01Gene53152 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene53154.t1 | Aspi01Gene53154 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0519.g075228 | No alias | not classified & original description: CDS=211-3699 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0601.g078900 | No alias | not classified & original description: CDS=275-3754 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g16245 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g31776 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g57886 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.04G075300.1 | Ceric.04G075300 | not classified & original description: pacid=50631416... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.35G031200.1 | Ceric.35G031200 | not classified & original description: pacid=50581090... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g23646 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g09002 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g16965 | No alias | not classified & original description: none | 0.12 | OrthoFinder output from all 47 species | |
| Ehy_g07958 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g10038 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01014219001 | No alias | RNA biosynthesis.transcriptional activation.PHD finger... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01017972001 | No alias | RNA biosynthesis.transcriptional activation.PHD finger... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_06644 | No alias | component IDM1 of ROS1-recruitment complex. PHD finger... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_10246 | No alias | PHD finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g59510.1 | LOC_Os04g59510 | PHD finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g07690.1 | LOC_Os07g07690 | PHD finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Len_g08378 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Len_g47387 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g02467 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06765 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_139275g0010 | No alias | PHD finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| MA_14500g0010 | No alias | component IDM1 of ROS1-recruitment complex. PHD finger... | 0.05 | OrthoFinder output from all 47 species | |
| MA_3931g0010 | No alias | PHD finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g13348 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g13767 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g18818 | No alias | component *(IDM1) of ROS1-recruitment complex & original... | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g01695 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g06867 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g18645 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g35938 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g01427 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g08147 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g08484 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g41948 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0009.g004313 | No alias | not classified & original description: CDS=588-5219 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0245.g026694 | No alias | not classified & original description: CDS=519-4760 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g15944 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g16192 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Smo80470 | No alias | RNA biosynthesis.transcriptional activation.PHD finger... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g065340.3.1 | Solyc09g065340 | PHD finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g076010.3.1 | Solyc09g076010 | PHD finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g21891 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g50990 | No alias | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Tin_g20194 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g21039 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g27963 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e005667_P001 | Zm00001e005667 | PHD finger transcription factor | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e032904_P002 | Zm00001e032904 | PHD finger transcription factor | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e042012_P001 | Zm00001e042012 | component IDM1 of ROS1-recruitment complex. PHD finger... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
| BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
| BP | GO:0043248 | proteasome assembly | IEP | HCCA |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
| BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| MF | GO:0060090 | molecular adaptor activity | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |