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  5. Mp6g15330.1

Mp6g15330.1


Description : component GID8 of ubiquitin protein ligase complex


Gene families : OG0003247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g15330.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cba_g07349 No alias component *(GID8) of GID ubiquitination complex &... 0.02 OrthoFinder output from all 47 species
Ehy_g15271 No alias component *(GID8) of GID ubiquitination complex &... 0.02 OrthoFinder output from all 47 species
LOC_Os03g13220.1 LOC_Os03g13220 component GID8 of ubiquitin protein ligase complex 0.03 OrthoFinder output from all 47 species
MA_175903g0010 No alias Protein GID8 homolog OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g16816 No alias component *(GID8) of GID ubiquitination complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e000970_P001 Zm00001e000970 component GID8 of ubiquitin protein ligase complex 0.03 OrthoFinder output from all 47 species
Zm00001e038630_P001 Zm00001e038630 component GID8 of ubiquitin protein ligase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR024964 CTLH/CRA 62 204
IPR006594 LisH 25 51
No external refs found!