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  5. Mp6g14830.1

Mp6g14830.1 (RKP)


Aliases : RKP

Description : E3 ubiquitin-protein ligase RKP OS=Arabidopsis thaliana (sp|q9siz8|rkp_arath : 1070.0)


Gene families : OG0003375 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003375_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g14830.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g011552 RKP E3 ubiquitin ligase *(RKP) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g01602 RKP E3 ubiquitin ligase *(RKP) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13229 RKP E3 ubiquitin ligase *(RKP) & original description: none 0.08 OrthoFinder output from all 47 species
Als_g16131 RKP E3 ubiquitin ligase *(RKP) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g02406 RKP E3 ubiquitin ligase *(RKP) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06774 RKP E3 ubiquitin ligase *(RKP) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene09679.t1 RKP, Aspi01Gene09679 E3 ubiquitin ligase *(RKP) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0043.g026953 RKP E3 ubiquitin ligase *(RKP) & original description: CDS=511-4113 0.03 OrthoFinder output from all 47 species
Cba_g07247 RKP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17418 RKP E3 ubiquitin ligase *(RKP) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.30G032900.1 RKP, Ceric.30G032900 E3 ubiquitin ligase *(RKP) & original description:... 0.07 OrthoFinder output from all 47 species
Dde_g00981 RKP E3 ubiquitin ligase *(RKP) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g18147 RKP E3 ubiquitin ligase *(RKP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022217001 RKP E3 ubiquitin-protein ligase RKP OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Len_g08871 RKP E3 ubiquitin ligase *(RKP) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05025 RKP E3 ubiquitin ligase *(RKP) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10429186g0010 RKP E3 ubiquitin-protein ligase RKP OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_61184g0010 RKP E3 ubiquitin-protein ligase RKP OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_8997746g0010 RKP E3 ubiquitin-protein ligase RKP OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g08940 RKP E3 ubiquitin ligase *(RKP) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g054140.4.1 RKP, Solyc04g054140 E3 ubiquitin-protein ligase RKP OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Tin_g08746 RKP E3 ubiquiTin ligase *(RKP) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR003877 SPRY_dom 182 300
No external refs found!