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  5. Mp6g12010.1

Mp6g12010.1


Description : Zinc finger CCCH domain-containing protein 62 OS=Oryza sativa subsp. japonica (sp|q338n2|c3h62_orysj : 162.0)


Gene families : OG0003528 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003528_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g12010.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g089294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36618 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g063020.4.1 Solyc06g063020 Zinc finger CCCH domain-containing protein 62 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Tin_g38598 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0051011 microtubule minus-end binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003034 SAP_dom 133 165
No external refs found!