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  5. Mp6g10380.1

Mp6g10380.1 (CLPS3)


Aliases : CLPS3

Description : component Clp1 of Cleavage Factor II (CF-IIm) complex


Gene families : OG0003520 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003520_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g10380.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g040962 CLPS3 component *(Clp1) of Cleavage Factor II (CF-IIm) complex... 0.02 OrthoFinder output from all 47 species
Aop_g22381 CLPS3 component *(Clp1) of Cleavage Factor II (CF-IIm) complex... 0.02 OrthoFinder output from all 47 species
Ceric.38G063700.1 CLPS3, Ceric.38G063700 component *(Clp1) of Cleavage Factor II (CF-IIm) complex... 0.04 OrthoFinder output from all 47 species
Cre03.g194800 CLPS3 RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.01 OrthoFinder output from all 47 species
LOC_Os02g12570.1 CLPS3, LOC_Os02g12570 component Clp1 of Cleavage Factor II (CF-IIm) complex 0.02 OrthoFinder output from all 47 species
Lfl_g10185 CLPS3 component *(Clp1) of Cleavage Factor II (CF-IIm) complex... 0.02 OrthoFinder output from all 47 species
Ore_g10724 CLPS3 component *(Clp1) of Cleavage Factor II (CF-IIm) complex... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017406 CLPS3 component *(Clp1) of Cleavage Factor II (CF-IIm) complex... 0.02 OrthoFinder output from all 47 species
Sam_g15976 No alias component *(Clp1) of Cleavage Factor II (CF-IIm) complex... 0.02 OrthoFinder output from all 47 species
Tin_g01837 CLPS3 component *(Clp1) of Cleavage Factor II (CF-IIm) complex... 0.03 OrthoFinder output from all 47 species
Zm00001e024954_P001 CLPS3, Zm00001e024954 component Clp1 of Cleavage Factor II (CF-IIm) complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0031124 mRNA 3'-end processing IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0007088 regulation of mitotic nuclear division IEP HCCA
BP GO:0007093 mitotic cell cycle checkpoint signaling IEP HCCA
BP GO:0007094 mitotic spindle assembly checkpoint signaling IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
BP GO:0010965 regulation of mitotic sister chromatid separation IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP HCCA
BP GO:0031577 spindle checkpoint signaling IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0033045 regulation of sister chromatid segregation IEP HCCA
BP GO:0033046 negative regulation of sister chromatid segregation IEP HCCA
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP HCCA
BP GO:0033048 negative regulation of mitotic sister chromatid segregation IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0045839 negative regulation of mitotic nuclear division IEP HCCA
BP GO:0045841 negative regulation of mitotic metaphase/anaphase transition IEP HCCA
BP GO:0045930 negative regulation of mitotic cell cycle IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0051783 regulation of nuclear division IEP HCCA
BP GO:0051784 negative regulation of nuclear division IEP HCCA
BP GO:0051983 regulation of chromosome segregation IEP HCCA
BP GO:0051985 negative regulation of chromosome segregation IEP HCCA
BP GO:0071173 spindle assembly checkpoint signaling IEP HCCA
BP GO:0071174 mitotic spindle checkpoint signaling IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901988 negative regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1901991 negative regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP HCCA
BP GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
BP GO:1905818 regulation of chromosome separation IEP HCCA
BP GO:1905819 negative regulation of chromosome separation IEP HCCA
BP GO:2000816 negative regulation of mitotic sister chromatid separation IEP HCCA
BP GO:2001251 negative regulation of chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR032319 CLP1_P 153 341
IPR010655 Clp1_C 346 457
IPR032324 Clp1_N 31 121
No external refs found!