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  5. Mp6g07170.1

Mp6g07170.1 (PAT2)


Aliases : PAT2

Description : large subunit beta of AP-3 Golgi to vacuole cargo adaptor complex


Gene families : OG0006164 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006164_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g07170.1
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AT3G55480 PAT2 protein affected trafficking 2 0.02 OrthoFinder output from all 47 species
Aev_g10362 PAT2 large subunit beta of AP-3 Golgi to vacuole cargo... 0.03 OrthoFinder output from all 47 species
Ala_g22699 PAT2 large subunit beta of AP-3 Golgi to vacuole cargo... 0.02 OrthoFinder output from all 47 species
Aob_g12108 PAT2 large subunit beta of AP-3 Golgi to vacuole cargo... 0.02 OrthoFinder output from all 47 species
Aop_g26219 PAT2 large subunit beta of AP-3 Golgi to vacuole cargo... 0.02 OrthoFinder output from all 47 species
Ceric.28G061600.1 PAT2, Ceric.28G061600 large subunit beta of AP-3 Golgi to vacuole cargo... 0.02 OrthoFinder output from all 47 species
Dac_g15365 PAT2 large subunit beta of AP-3 Golgi to vacuole cargo... 0.02 OrthoFinder output from all 47 species
Dcu_g19428 PAT2 large subunit beta of AP-3 Golgi to vacuole cargo... 0.02 OrthoFinder output from all 47 species
Gb_19472 PAT2 large subunit beta of AP-3 Golgi to vacuole cargo adaptor complex 0.02 OrthoFinder output from all 47 species
LOC_Os01g74180.1 PAT2, LOC_Os01g74180 large subunit beta of AP-3 Golgi to vacuole cargo adaptor complex 0.03 OrthoFinder output from all 47 species
MA_175737g0010 PAT2 AP3-complex subunit beta-A OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Smo118138 PAT2 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
Solyc06g043030.4.1 PAT2, Solyc06g043030 large subunit beta of AP-3 Golgi to vacuole cargo adaptor complex 0.06 OrthoFinder output from all 47 species
Zm00001e029209_P001 PAT2, Zm00001e029209 large subunit beta of AP-3 Golgi to vacuole cargo adaptor complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005548 phospholipid transporter activity IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0007009 plasma membrane organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015914 phospholipid transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0017121 plasma membrane phospholipid scrambling IEP HCCA
MF GO:0017128 phospholipid scramblase activity IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034204 lipid translocation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045332 phospholipid translocation IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
CC GO:0070531 BRCA1-A complex IEP HCCA
CC GO:0070552 BRISC complex IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0097035 regulation of membrane lipid distribution IEP HCCA
BP GO:0097354 prenylation IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
MF GO:0140303 intramembrane lipid transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002553 Clathrin/coatomer_adapt-like_N 38 499
IPR002553 Clathrin/coatomer_adapt-like_N 536 675
IPR029390 AP3B_C 962 1044
No external refs found!