Mp6g03150.1 (HIS1-3)

Aliases : HIS1-3

Description : linker histone (H1)

Gene families : OG0000310 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000310_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp6g03150.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00057p00112340	HIS1-3,...	Chromatin organisation.histones.H1 linker histone	0.07	OrthoFinder output from all 47 species
AT1G06760	No alias	winged-helix DNA-binding transcription factor family protein	0.14	OrthoFinder output from all 47 species
Adi_g012251	HIS1-3	linker histone *(H1) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g052669	No alias	linker histone *(H1) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g14110	No alias	linker histone *(H1) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene11879.t1	HIS1-3, Aspi01Gene11879	linker histone *(H1) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene11880.t1	HIS1-3, Aspi01Gene11880	linker histone *(H1) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.05G101000.1	HIS1-3, Ceric.05G101000	linker histone *(H1) & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.16G003600.1	Ceric.16G003600	linker histone *(H1) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.17G067800.1	HIS1-3, Ceric.17G067800	linker histone *(H1) & original description:...	0.02	OrthoFinder output from all 47 species
Cre13.g567450	HIS1-3	Chromatin organisation.histones.H1 linker histone	0.08	OrthoFinder output from all 47 species
Dac_g20797	HIS1-3	linker histone *(H1) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01028074001	No alias	Chromatin organisation.histones.H1 linker histone	0.05	OrthoFinder output from all 47 species
Gb_02738	No alias	linker histone (H1)	0.12	OrthoFinder output from all 47 species
LOC_Os04g18090.1	HIS1-3, LOC_Os04g18090	linker histone (H1)	0.1	OrthoFinder output from all 47 species
LOC_Os07g08710.1	LOC_Os07g08710	linker histone (H1)	0.03	OrthoFinder output from all 47 species
Len_g23782	HIS1-3	linker histone *(H1) & original description: none	0.02	OrthoFinder output from all 47 species
MA_102457g0010	No alias	linker histone (H1)	0.03	OrthoFinder output from all 47 species
MA_10428525g0020	No alias	linker histone (H1)	0.05	OrthoFinder output from all 47 species
MA_10436125g0020	ATTRB1, TRB1	linker histone (H1)	0.03	OrthoFinder output from all 47 species
MA_11137g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_11231g0010	HIS1-3	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_500183g0010	HIS1-3	linker histone (H1)	0.04	OrthoFinder output from all 47 species
MA_877599g0010	No alias	linker histone (H1)	0.02	OrthoFinder output from all 47 species
Ppi_g59703	HIS1-3	linker histone *(H1) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g11041	No alias	linker histone *(H1) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g11042	No alias	linker histone *(H1) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc09g083380.4.1	Solyc09g083380	linker histone (H1)	0.06	OrthoFinder output from all 47 species
Spa_g50935	HIS1-3	linker histone *(H1) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e006018_P006	Zm00001e006018	linker histone (H1)	0.02	OrthoFinder output from all 47 species
Zm00001e007189_P001	HIS1-3, Zm00001e007189	linker histone (H1)	0.06	OrthoFinder output from all 47 species
Zm00001e011857_P001	Zm00001e011857	linker histone (H1)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006334	nucleosome assembly	IEA	Interproscan
BP	GO:0006338	chromatin remodeling	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
BP	GO:0034728	nucleosome organization	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
BP	GO:0043933	protein-containing complex organization	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065004	protein-DNA complex assembly	None	Extended
BP	GO:0071824	protein-DNA complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0007021	tubulin complex assembly	IEP	HCCA
BP	GO:0007023	post-chaperonin tubulin folding pathway	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0048487	beta-tubulin binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005818	Histone_H1/H5_H15	57	124

External Links

No external refs found!

Mp6g03150.1 (HIS1-3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation