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  5. Mp5g22450.1

Mp5g22450.1


Description : histone (H4)


Gene families : OG0000254 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000254_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g22450.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00201000 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00220160 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Adi_g068069 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05602 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31946 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18960.t1 Aspi01Gene18960 histone *(H4) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32146.t1 Aspi01Gene32146 histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G079500.1 Ceric.11G079500 histone *(H4) & original description: pacid=50595239... 0.03 OrthoFinder output from all 47 species
Ceric.29G055000.1 Ceric.29G055000 histone *(H4) & original description: pacid=50624348... 0.03 OrthoFinder output from all 47 species
Gb_10374 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
Gb_24017 No alias histone (H4) 0.05 OrthoFinder output from all 47 species
Lfl_g21947 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
MA_38882g0010 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
MA_465285g0010 No alias histone (H4) 0.05 OrthoFinder output from all 47 species
MA_97185g0020 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
MA_97951g0010 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
Mp4g13440.1 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
Ppi_g59171 No alias histone *(H4) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003555 No alias histone *(H4) & original description: CDS=1-312 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g011995 No alias histone *(H4) & original description: CDS=1-312 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012615 No alias histone *(H4) & original description: CDS=1-477 0.03 OrthoFinder output from all 47 species
Tin_g10909 No alias histone *(H4) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 36 96
No external refs found!