1. Home
  2. Species
  3. Marchantia polymorpha
  4. Sequence
  5. Mp5g21000.1

Mp5g21000.1 (CHR20, ATRX)


Aliases : CHR20, ATRX

Description : chromatin remodeling factor (ATRX)


Gene families : OG0003866 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003866_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g21000.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g021727 CHR20, ATRX chromatin remodeling factor *(ATRX) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21446 CHR20, ATRX not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16593 CHR20, ATRX chromatin remodeling factor *(ATRX) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09035 CHR20, ATRX chromatin remodeling factor *(ATRX) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14539.t1 CHR20, ATRX,... chromatin remodeling factor *(ATRX) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40160.t1 CHR20, ATRX,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40161.t1 CHR20, ATRX,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g32485 CHR20, ATRX chromatin remodeling factor *(ATRX) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g34455 CHR20, ATRX chromatin remodeling factor *(ATRX) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01023393001 CHR20, ATRX Chromatin organisation.chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Lfl_g03487 CHR20, ATRX chromatin remodeling factor *(ATRX) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00674 CHR20, ATRX chromatin remodeling factor *(ATRX) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08109 No alias chromatin remodeling factor *(ATRX) & original description: none 0.03 OrthoFinder output from all 47 species
Smo441095 CHR20, ATRX Chromatin organisation.chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Solyc04g050150.4.1 CHR20, ATRX,... chromatin remodeling factor (ATRX) 0.04 OrthoFinder output from all 47 species
Solyc04g050160.4.1 CHR20, ATRX,... Protein CHROMATIN REMODELING 20 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
CC GO:0071203 WASH complex IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
InterPro domains Description Start Stop
IPR041430 ADD_ATRX 989 1042
IPR000330 SNF2_N 1247 1575
IPR001650 Helicase_C 1665 1791
No external refs found!