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  5. Mp5g18780.1

Mp5g18780.1 (SECA2)


Aliases : SECA2

Description : component SecA2 of inner envelope Sec2 post-import insertion system


Gene families : OG0001541 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001541_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g18780.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00116920 SECA1, AtcpSecA,... Protein translocation.chloroplast.thylakoid membrane... 0.02 OrthoFinder output from all 47 species
Ceric.02G067600.1 SECA1, AtcpSecA,... component *(SecA1) of thylakoid membrane Sec1... 0.02 OrthoFinder output from all 47 species
Ceric.13G044200.1 SECA2, Ceric.13G044200 component *(SecA2) of inner envelope Sec2 post-import... 0.03 OrthoFinder output from all 47 species
Cre11.g467711 SECA2 Protein translocase subunit SecA, chloroplastic... 0.04 OrthoFinder output from all 47 species
GSVIVT01008813001 SECA2 Protein translocation.chloroplast.inner envelope Sec2... 0.02 OrthoFinder output from all 47 species
Lfl_g10903 SECA2 component *(SecA2) of inner envelope Sec2 post-import... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011794 SECA2 component *(SecA2) of inner envelope Sec2 post-import... 0.02 OrthoFinder output from all 47 species
Sam_g16150 No alias component *(SecA2) of inner envelope Sec2 post-import... 0.02 OrthoFinder output from all 47 species
Smo176627 SECA2 Protein translocation.chloroplast.inner envelope Sec2... 0.02 OrthoFinder output from all 47 species
Solyc11g005020.3.1 SECA2, Solyc11g005020 component SecA2 of inner envelope Sec2 post-import... 0.03 OrthoFinder output from all 47 species
Spa_g06743 SECA2 component *(SecA2) of inner envelope Sec2 post-import... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0017038 protein import IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR011115 SecA_DEAD 107 478
IPR011130 SecA_preprotein_X-link_dom 331 435
IPR011116 SecA_Wing/Scaffold 797 1080
No external refs found!