Aliases : RBP-DR1, AtRBP-DR1
Description : RNA-binding protein BRN1 OS=Arabidopsis thaliana (sp|q8lfs6|brn1l_arath : 393.0)
Gene families : OG0001208 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001208_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g023113 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g28286 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g28529 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g39063 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.06G016000.1 | Ceric.06G016000 | not classified & original description: pacid=50619514... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g04525 | RBP-DR1, AtRBP-DR1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g43236 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Ehy_g13021 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Gb_00863 | FCA | no description available(sp|b8bcz8|fca_orysi : 290.0) | 0.04 | OrthoFinder output from all 47 species | |
Gb_05124 | FCA | no description available(sp|b8bcz8|fca_orysi : 224.0) | 0.05 | OrthoFinder output from all 47 species | |
Gb_06455 | RBP-DR1, AtRBP-DR1 | RNA-binding protein BRN1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
Len_g22611 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g08750 | RBP-DR1, AtRBP-DR1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g44791 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g24304 | RBP-DR1, AtRBP-DR1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g31456 | FCA | transcription factor *(FCA/SSF) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g37448 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g058450.3.1 | FCA, Solyc01g058450 | Flowering time control protein FCA OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g00398 | RBP-DR1, AtRBP-DR1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g20389 | RBP-DR1, AtRBP-DR1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
CC | GO:0005643 | nuclear pore | IEP | HCCA |
BP | GO:0006260 | DNA replication | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
MF | GO:0017056 | structural constituent of nuclear pore | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0034728 | nucleosome organization | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043138 | 3'-5' DNA helicase activity | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
No external refs found! |