Mp5g00540.1 (ATH7, ATATH7)

Aliases : ATH7, ATATH7

Description : subfamily ABCA transporter

Gene families : OG0001879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001879_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp5g00540.1
Cluster	HCCA: Cluster_4

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00078p00139590	ATH16, ATATH16,...	ABC transporter A family member 12 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AT3G47760	ATATH4, ABCA5, ATH4	ABC2 homolog 4	0.01	OrthoFinder output from all 47 species
AT3G47780	ATATH6, ATH6	ABC2 homolog 6	0.02	OrthoFinder output from all 47 species
Als_g38161	ATATH6, ATH6	subfamily ABCA transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g04431	ATATH6, ATH6	subfamily ABCA transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene22768.t2	ATH7, ATATH7,...	subfamily ABCA transporter & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0022.g016229	ATATH6, ATH6	subfamily ABCA transporter & original description: CDS=234-3275	0.02	OrthoFinder output from all 47 species
MA_119138g0010	ATATH6, ATH6	subfamily ABCA transporter	0.02	OrthoFinder output from all 47 species
Msp_g11278	ATATH6, ATH6	subfamily ABCA transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g03426	ATH7, ATATH7	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Pir_g40039	ATH16, ATATH16	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g16539	No alias	subfamily ABCA transporter & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	676	820

External Links

No external refs found!