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  5. Mp4g21380.1

Mp4g21380.1


Description : GDP1 LSU processome maturation factor


Gene families : OG0004560 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004560_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g21380.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0006.g010068 No alias GDP1 LSU processome maturation factor & original... 0.02 OrthoFinder output from all 47 species
Dde_g23767 No alias GDP1 LSU processome maturation factor & original... 0.01 OrthoFinder output from all 47 species
Solyc08g081580.4.1 Solyc08g081580 GDP1 LSU processome maturation factor 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017150 tRNA dihydrouridine synthase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0106413 dihydrouridine synthase activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000467 G_patch_dom 16 57
No external refs found!