Aliases : ATRABE1C, ATRAB8A, ARA-3, RAB8A, ARA3
Description : E-class RAB GTPase
Gene families : OG0000945 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000945_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g020689 | ATRABE1D,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g117529 | ATRABE1C,... | E-class RAB GTPase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cre15.g641800 | ATRABE1D,... | GTP-binding protein yptV2 OS=Volvox carteri | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os03g60530.1 | ATRABE1C,... | E-class RAB GTPase | 0.03 | OrthoFinder output from all 47 species | |
MA_10431596g0010 | ATRABE1C,... | E-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species | |
MA_94850g0010 | ATRABE1D,... | Ras-related protein RABE1e OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g11145 | ATRABE1E, ATRAB8E, RABE1e | E-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pp3c25_7430V3.1 | ATRABE1C,... | RAB GTPase homolog 8A | 0.01 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0001.g000647 | ATRABE1D,... | not classified & original description: CDS=1-615 | 0.02 | OrthoFinder output from all 47 species | |
Spa_g10252 | ATRABE1C,... | E-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e006180_P001 | ATRABE1C,... | E-class RAB GTPase | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003924 | GTPase activity | IEA | Interproscan |
MF | GO:0005525 | GTP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
MF | GO:0005543 | phospholipid binding | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006265 | DNA topological change | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
MF | GO:0008289 | lipid binding | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0071103 | DNA conformation change | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001806 | Small_GTPase | 17 | 178 |
No external refs found! |