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  5. Mp4g16720.1

Mp4g16720.1


Description : Patellin-6 OS=Arabidopsis thaliana (sp|q9scu1|patl6_arath : 336.0)


Gene families : OG0000756 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000756_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g16720.1
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00036450 evm_27.TU.AmTr_v1... Patellin-4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G22530 PATL2 PATELLIN 2 0.04 OrthoFinder output from all 47 species
AT1G30690 No alias Sec14p-like phosphatidylinositol transfer family protein 0.02 OrthoFinder output from all 47 species
AT1G72160 No alias Sec14p-like phosphatidylinositol transfer family protein 0.02 OrthoFinder output from all 47 species
Adi_g039396 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067850 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g112514 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g38820 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g05403 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06939 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39197 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26093 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06601.t1 Aspi01Gene06601 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10662 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g13246 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G077900.1 Ceric.03G077900 not classified & original description: pacid=50572716... 0.03 OrthoFinder output from all 47 species
Dcu_g09471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01028342001 No alias Patellin-4 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01030264001 No alias Patellin-6 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01036782001 No alias Patellin-4 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_20479 No alias Patellin-6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_29964 No alias Patellin-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g65380.1 LOC_Os01g65380 Patellin-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g27820.1 LOC_Os05g27820 Patellin-6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g35460.1 LOC_Os05g35460 Patellin-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g05578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_1115516g0010 No alias Patellin-3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_19741g0010 No alias Patellin-6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_9244g0010 No alias Patellin-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp4g06280.1 No alias Patellin-6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g24618 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13387 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23613 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e019109_P003 Zm00001e019109 Patellin-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e026912_P001 Zm00001e026912 Patellin-6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e031502_P004 Zm00001e031502 Patellin-6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e031729_P005 Zm00001e031729 Patellin-5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008272 sulfate transport IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 492 652
IPR011074 CRAL/TRIO_N_dom 427 468
No external refs found!