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  5. Mp4g16100.1

Mp4g16100.1


Description : no hits & (original description: none)


Gene families : OG0004400 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004400_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g16100.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AT4G30990 No alias ARM repeat superfamily protein 0.09 OrthoFinder output from all 47 species
Aev_g15020 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14333 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0105.g044994 No alias not classified & original description: CDS=23-8209 0.04 OrthoFinder output from all 47 species
Ceric.31G030600.1 Ceric.31G030600 not classified & original description: pacid=50574249... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000137.1 No alias No description available 0.08 OrthoFinder output from all 47 species
Cre10.g461000 No alias No description available 0.1 OrthoFinder output from all 47 species
Dcu_g13106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03006 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g17424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021009001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os01g40250.1 LOC_Os01g40250 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Lfl_g13195 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10428483g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_131618g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_51913g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sam_g17460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo444016 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc09g092240.3.1 Solyc09g092240 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Tin_g27076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016650_P001 Zm00001e016650 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR011430 UTP20_N 985 1654
No external refs found!