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  5. Mp4g15500.1

Mp4g15500.1 (ATVPS33, VPS33)


Aliases : ATVPS33, VPS33

Description : component VPS33 of HOPS/CORVET membrane tethering complexes


Gene families : OG0004462 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004462_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g15500.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Als_g06316 ATVPS33, VPS33 component *(VPS33) of HOPS/CORVET membrane tethering... 0.04 OrthoFinder output from all 47 species
Aspi01Gene15583.t1 ATVPS33, VPS33,... component *(VPS33) of HOPS/CORVET membrane tethering... 0.02 OrthoFinder output from all 47 species
Ceric.21G067400.1 ATVPS33, VPS33,... component *(VPS33) of HOPS/CORVET membrane tethering... 0.03 OrthoFinder output from all 47 species
Dcu_g14537 ATVPS33, VPS33 component *(VPS33) of HOPS/CORVET membrane tethering... 0.04 OrthoFinder output from all 47 species
GSVIVT01016224001 ATVPS33, VPS33 Vesicle trafficking.target membrane... 0.03 OrthoFinder output from all 47 species
Gb_31715 ATVPS33, VPS33 component VPS33 of HOPS/CORVET membrane tethering complexes 0.04 OrthoFinder output from all 47 species
LOC_Os04g14654.2 ATVPS33, VPS33,... component VPS33 of HOPS/CORVET membrane tethering complexes 0.04 OrthoFinder output from all 47 species
Len_g02362 ATVPS33, VPS33 component *(VPS33) of HOPS/CORVET membrane tethering... 0.02 OrthoFinder output from all 47 species
Nbi_g05330 ATVPS33, VPS33 component *(VPS33) of HOPS/CORVET membrane tethering... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008728 ATVPS33, VPS33 component *(VPS33) of HOPS/CORVET membrane tethering... 0.02 OrthoFinder output from all 47 species
Solyc05g055600.4.1 ATVPS33, VPS33,... component VPS33 of HOPS/CORVET membrane tethering complexes 0.06 OrthoFinder output from all 47 species
Zm00001e027747_P001 ATVPS33, VPS33,... component VPS33 of HOPS/CORVET membrane tethering complexes 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006904 vesicle docking involved in exocytosis IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR001619 Sec1-like 36 601
No external refs found!