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  5. Mp4g15480.1

Mp4g15480.1 (CCB1)


Aliases : CCB1

Description : assembly factor CCB1 of CCB cytochrome b6 maturation system (system IV)


Gene families : OG0006907 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006907_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g15480.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00074040 CCB1,... Photosynthesis.photophosphorylation.cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
AT3G26710 CCB1 cofactor assembly of complex C 0.04 OrthoFinder output from all 47 species
Adi_g089508 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.02 OrthoFinder output from all 47 species
Als_g54717 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.02 OrthoFinder output from all 47 species
Aob_g20691 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.02 OrthoFinder output from all 47 species
Aspi01Gene65930.t2 CCB1, Aspi01Gene65930 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.02 OrthoFinder output from all 47 species
Cba_g10743 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.02 OrthoFinder output from all 47 species
Ceric.22G072900.1 CCB1, Ceric.22G072900 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.02 OrthoFinder output from all 47 species
Cre16.g662150 CCB1 Photosynthesis.photophosphorylation.cytochrome b6/f... 0.02 OrthoFinder output from all 47 species
Dac_g22896 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.02 OrthoFinder output from all 47 species
Dcu_g02462 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.04 OrthoFinder output from all 47 species
Dde_g16667 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.02 OrthoFinder output from all 47 species
Ehy_g22554 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.02 OrthoFinder output from all 47 species
LOC_Os11g32320.1 CCB1, LOC_Os11g32320 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.02 OrthoFinder output from all 47 species
MA_10429833g0010 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.04 OrthoFinder output from all 47 species
Nbi_g14152 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.03 OrthoFinder output from all 47 species
Pir_g15644 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.02 OrthoFinder output from all 47 species
Pnu_g07222 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.03 OrthoFinder output from all 47 species
Ppi_g30079 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.03 OrthoFinder output from all 47 species
Solyc02g005210.3.1 CCB1, Solyc02g005210 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.03 OrthoFinder output from all 47 species
Tin_g24718 CCB1 assembly factor CCB1 of CCB cytochrome b6 maturation... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR021919 CCB1 128 297
No external refs found!