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  5. Mp4g14600.1

Mp4g14600.1


Description : Ankyrin repeat domain-containing protein, chloroplastic OS=Arabidopsis thaliana (sp|q05753|akrp_arath : 169.0)


Gene families : OG0002523 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002523_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g14600.1

Target Alias Description ECC score Gene Family Method Actions
Als_g07232 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0092.g043044 No alias not classified & original description: CDS=221-829 0.04 OrthoFinder output from all 47 species
Azfi_s0212.g058202 No alias not classified & original description: CDS=359-1396 0.03 OrthoFinder output from all 47 species
Ceric.02G110600.1 Ceric.02G110600 not classified & original description: pacid=50584977... 0.04 OrthoFinder output from all 47 species
Ceric.14G014700.1 Ceric.14G014700 not classified & original description: pacid=50633928... 0.02 OrthoFinder output from all 47 species
Ehy_g02482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01005198001 EMB16, EMB2036, AKRP Ankyrin repeat domain-containing protein, chloroplastic... 0.05 OrthoFinder output from all 47 species
Gb_02757 EMB139, EMB506 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g13000.1 EMB139, EMB506,... Ankyrin repeat domain-containing protein EMB506,... 0.02 OrthoFinder output from all 47 species
Len_g20404 EMB139, EMB506 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g00869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18520 EMB16, EMB2036, AKRP not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04583 EMB139, EMB506 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012861 No alias not classified & original description: CDS=270-1178 0.03 OrthoFinder output from all 47 species
Sam_g52287 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g061820.4.1 EMB16, EMB2036,... Ankyrin repeat domain-containing protein, chloroplastic... 0.03 OrthoFinder output from all 47 species
Solyc09g009290.3.1 EMB139, EMB506,... Ankyrin repeat domain-containing protein EMB506,... 0.06 OrthoFinder output from all 47 species
Spa_g15917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47848 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51199 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g29609 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e025292_P002 EMB139, EMB506,... Ankyrin repeat domain-containing protein EMB506,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0004797 thymidine kinase activity IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0019136 deoxynucleoside kinase activity IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
MF GO:0019206 nucleoside kinase activity IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR020683 DUF3447 351 415
No external refs found!