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  5. Mp4g11800.1

Mp4g11800.1 (SHM7)


Aliases : SHM7

Description : serine hydroxymethyltransferase. serine hydroxymethyltransferase


Gene families : OG0000518 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000518_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g11800.1
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Aev_g19996 SHM7 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Cre09.g411900 AtSHMT3, SHM3 Photosynthesis.photorespiration.serine hydroxymethyltransferase 0.03 OrthoFinder output from all 47 species
Pir_g12175 SHM7 EC_2.1 transferase transferring one-carbon group &... 0.01 OrthoFinder output from all 47 species
Pnu_g16808 AtSHMT3, SHM3 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Smo166496 SHM4 Amino acid metabolism.biosynthesis.serine... 0.02 OrthoFinder output from all 47 species
Solyc02g091560.3.1 STM, SHM1,... serine hydroxymethyltransferase 0.02 OrthoFinder output from all 47 species
Tin_g21023 SHM7 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017150 tRNA dihydrouridine synthase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0106413 dihydrouridine synthase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 248 654
No external refs found!