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  5. Mp4g11450.3

Mp4g11450.3 (CID12, ATRBP37, RBP37)


Aliases : CID12, ATRBP37, RBP37

Description : Polyadenylate-binding protein-interacting protein 11 OS=Arabidopsis thaliana (sp|q9lpi5|cid11_arath : 397.0)


Gene families : OG0000804 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000804_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g11450.3

Target Alias Description ECC score Gene Family Method Actions
Adi_g007671 CID11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g020522 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088809 CID12, ATRBP37, RBP37 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g46209 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01349 CID10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13697 CID12, ATRBP37, RBP37 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19462 CID12, ATRBP37, RBP37 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene26585.t1 CID11, Aspi01Gene26585 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene39012.t2 CID12, ATRBP37,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55414.t1 CID11, Aspi01Gene55414 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0038.g026169 CID11 not classified & original description: CDS=99-1196 0.02 OrthoFinder output from all 47 species
Cba_g07610 CID12, ATRBP37, RBP37 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.30G073000.1 CID11, Ceric.30G073000 not classified & original description: pacid=50609234... 0.03 OrthoFinder output from all 47 species
Ceric.36G006700.1 CID12, ATRBP37,... not classified & original description: pacid=50568877... 0.02 OrthoFinder output from all 47 species
Dac_g44818 CID12, ATRBP37, RBP37 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g13676 CID12, ATRBP37, RBP37 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001961001 CID9 Polyadenylate-binding protein-interacting protein 9... 0.02 OrthoFinder output from all 47 species
Len_g07278 CID12, ATRBP37, RBP37 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g12977 CID12, ATRBP37, RBP37 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26206 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31891 CID12, ATRBP37, RBP37 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10941 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02795 CID12, ATRBP37, RBP37 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17641 CID12, ATRBP37, RBP37 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02187 CID12, ATRBP37, RBP37 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12178 CID12, ATRBP37, RBP37 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05210 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026028_P001 CID9, Zm00001e026028 Polyadenylate-binding protein-interacting protein 9... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0070402 NADPH binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 338 405
IPR000504 RRM_dom 241 303
IPR009818 Ataxin-2_C 179 193
No external refs found!