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  5. Mp4g09260.1

Mp4g09260.1


Description : Met-tRNA positioning component eIF5B of initiator tRNA carrier complex


Gene families : OG0003112 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003112_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g09260.1
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AT1G76810 No alias eukaryotic translation initiation factor 2 (eIF-2) family protein 0.04 OrthoFinder output from all 47 species
AT2G27700 No alias eukaryotic translation initiation factor 2 family... 0.02 OrthoFinder output from all 47 species
Adi_g012011 No alias Met-tRNA positioning component *(eIF5B) of initiator... 0.03 OrthoFinder output from all 47 species
Aev_g37468 No alias Met-tRNA positioning component *(eIF5B) of initiator... 0.05 OrthoFinder output from all 47 species
Ala_g02700 No alias Met-tRNA positioning component *(eIF5B) of initiator... 0.05 OrthoFinder output from all 47 species
Als_g22498 No alias Met-tRNA positioning component *(eIF5B) of initiator... 0.02 OrthoFinder output from all 47 species
Aob_g07436 No alias Met-tRNA positioning component *(eIF5B) of initiator... 0.06 OrthoFinder output from all 47 species
Aop_g09056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20388.t1 Aspi01Gene20388 Met-tRNA positioning component *(eIF5B) of initiator... 0.02 OrthoFinder output from all 47 species
Dde_g25106 No alias Met-tRNA positioning component *(eIF5B) of initiator... 0.07 OrthoFinder output from all 47 species
Ehy_g14997 No alias Met-tRNA positioning component *(eIF5B) of initiator... 0.02 OrthoFinder output from all 47 species
GSVIVT01034895001 No alias Protein biosynthesis.translation initiation.eIF5B... 0.05 OrthoFinder output from all 47 species
Ore_g16364 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g25594 No alias Met-tRNA positioning component *(eIF5B) of initiator... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
InterPro domains Description Start Stop
IPR004161 EFTu-like_2 1182 1259
IPR000795 T_Tr_GTP-bd_dom 947 1155
IPR023115 TIF_IF2_dom3 1281 1384
No external refs found!