- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : PHD finger transcription factor
Gene families : OG0003668 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003668_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G12400 | No alias | DNA binding;zinc ion binding;DNA binding | 0.04 | OrthoFinder output from all 47 species | |
| AT5G22760 | No alias | PHD finger family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G35210 | No alias | metalloendopeptidases;zinc ion binding;DNA binding | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g023154 | No alias | PHD finger transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g107345 | No alias | PHD finger transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aev_g10447 | No alias | PHD finger transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g26643 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g29357 | No alias | PHD finger transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene10761.t1 | Aspi01Gene10761 | PHD finger transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene10763.t1 | Aspi01Gene10763 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene36310.t1 | Aspi01Gene36310 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene36311.t1 | Aspi01Gene36311 | PHD finger transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.29G051900.1 | Ceric.29G051900 | PHD finger transcription factor & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Cre05.g247000 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g04154 | No alias | PHD finger transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g08699 | No alias | PHD finger transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g17420 | No alias | PHD finger transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01031411001 | No alias | RNA biosynthesis.transcriptional activation.PHD finger... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01037231001 | No alias | RNA biosynthesis.transcriptional activation.PHD finger... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os11g05130.1 | LOC_Os11g05130 | PHD finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g05757 | No alias | PHD finger transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g36416 | No alias | PHD finger transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g20406 | No alias | PHD finger transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g03291 | No alias | PHD finger transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0007.g003692 | No alias | PHD finger transcription factor & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g25995 | No alias | PHD finger transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo441144 | No alias | RNA biosynthesis.transcriptional activation.PHD finger... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g065160.3.1 | Solyc11g065160 | PHD finger transcription factor | 0.08 | OrthoFinder output from all 47 species | |
| Solyc11g066780.3.1 | Solyc11g066780 | PHD finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e035778_P001 | Zm00001e035778 | PHD finger transcription factor | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
| CC | GO:0016459 | myosin complex | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |