Aliases : RAD51, ATRAD51
Description : component RAD51 of BRCC DNA-damage response complex
Gene families : OG0001716 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001716_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Mp3g22920.1 | |
Cluster | HCCA: Cluster_7 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ala_g23150 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.02 | OrthoFinder output from all 47 species | |
Als_g52823 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.01G082000.1 | RAD51, ATRAD51,... | component *(RAD51) of BRCC regulatory deubiquination... | 0.04 | OrthoFinder output from all 47 species | |
Cre06.g278151 | XRCC3, ATXRCC3 | DNA repair protein XRCC3 homolog OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Cre14.g622850 | RAD51, ATRAD51 | DNA damage response.BRCC DNA-damage response... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g00622 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g00814 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01015002001 | RAD51, ATRAD51 | DNA damage response.BRCC DNA-damage response... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os12g31370.1 | RAD51, ATRAD51,... | component RAD51 of BRCC DNA-damage response complex | 0.04 | OrthoFinder output from all 47 species | |
Len_g59568 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.05 | OrthoFinder output from all 47 species | |
MA_93267g0020 | RAD51, ATRAD51 | DNA repair protein RAD51 homolog 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g01981 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g04179 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g08435 | XRCC3, ATXRCC3 | component *(XRCC3) of RAD51c-XRCC3 accessory DSB repair... | 0.03 | OrthoFinder output from all 47 species | |
Solyc07g017540.4.1 | RAD51, ATRAD51,... | component RAD51 of BRCC DNA-damage response complex | 0.03 | OrthoFinder output from all 47 species | |
Tin_g05894 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
MF | GO:0004672 | protein kinase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005576 | extracellular region | IEP | HCCA |
CC | GO:0005618 | cell wall | IEP | HCCA |
BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
BP | GO:0006270 | DNA replication initiation | IEP | HCCA |
BP | GO:0006275 | regulation of DNA replication | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
CC | GO:0048046 | apoplast | IEP | HCCA |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
BP | GO:0051052 | regulation of DNA metabolic process | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013632 | DNA_recomb/repair_Rad51_C | 84 | 337 |
No external refs found! |