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  5. Mp3g00800.1

Mp3g00800.1 (AtHPR1, AtTHO1, THO1, HPR1)


Aliases : AtHPR1, AtTHO1, THO1, HPR1

Description : component THOC1/HPR1 of mRNP trafficking THO subcomplex


Gene families : OG0005828 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005828_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g00800.1

Target Alias Description ECC score Gene Family Method Actions
AT5G09860 AtHPR1, AtTHO1,... nuclear matrix protein-related 0.03 OrthoFinder output from all 47 species
Aev_g07899 AtHPR1, AtTHO1,... component *(THOC1/HPR1) of mRNP trafficking THO... 0.02 OrthoFinder output from all 47 species
Ceric.1Z091900.1 AtHPR1, AtTHO1,... component *(THOC1/HPR1) of mRNP trafficking THO... 0.02 OrthoFinder output from all 47 species
Cre16.g695300 AtHPR1, AtTHO1,... RNA processing.messenger ribonucleoprotein particle... 0.01 OrthoFinder output from all 47 species
Dcu_g09998 AtHPR1, AtTHO1,... component *(THOC1/HPR1) of mRNP trafficking THO... 0.02 OrthoFinder output from all 47 species
Ehy_g01414 AtHPR1, AtTHO1,... component *(THOC1/HPR1) of mRNP trafficking THO... 0.02 OrthoFinder output from all 47 species
GSVIVT01036611001 AtHPR1, AtTHO1,... RNA processing.messenger ribonucleoprotein particle... 0.01 OrthoFinder output from all 47 species
Smo96989 AtHPR1, AtTHO1,... RNA processing.messenger ribonucleoprotein particle... 0.02 OrthoFinder output from all 47 species
Solyc01g096600.4.1 AtHPR1, AtTHO1,... component THOC1/HPR1 of mRNP trafficking THO subcomplex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006914 autophagy IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0016972 thiol oxidase activity IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
InterPro domains Description Start Stop
IPR021861 THO_THOC1 177 581
No external refs found!