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  5. Mp2g20110.1

Mp2g20110.1


Description : Dammaradiene synthase OS=Dryopteris crassirhizoma (sp|b3y522|dcd_dryca : 205.0)


Gene families : OG0002047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002047_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp2g20110.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Ala_g28633 ATLUP2, LUP2 squalene-hopene cyclase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g28712 ATLUP2, LUP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06696 ATLUP2, LUP2 squalene-hopene cyclase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06990 No alias squalene-hopene cyclase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07397 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12100 ATLUP2, LUP2 squalene-hopene cyclase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g69424 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10453.t1 ATLUP2, LUP2,... squalene-hopene cyclase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24548.t1 Aspi01Gene24548 squalene-hopene cyclase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24549.t1 ATLUP2, LUP2,... EC_5.4 intramolecular transferase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene24550.t1 Aspi01Gene24550 squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24552.t1 Aspi01Gene24552 squalene-hopene cyclase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24556.t1 ATLUP2, LUP2,... squalene-hopene cyclase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene36059.t1 ATLUP2, LUP2,... squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36060.t1 ATLUP2, LUP2,... squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36061.t1 Aspi01Gene36061 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36140.t1 Aspi01Gene36140 squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63178.t1 Aspi01Gene63178 EC_5.4 intramolecular transferase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63179.t1 Aspi01Gene63179 EC_5.4 intramolecular transferase & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05266 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19102 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24187 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g29334 No alias EC_5.4 intramolecular transferase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g31336 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g31905 No alias squalene-hopene cyclase & original description: none 0.02 OrthoFinder output from all 47 species
Mp8g14000.1 THAS1, THAS Dammaradiene synthase OS=Dryopteris crassirhizoma... 0.04 OrthoFinder output from all 47 species
Mp8g14150.1 LAS1 Dammaradiene synthase OS=Dryopteris crassirhizoma... 0.04 OrthoFinder output from all 47 species
Msp_g20864 ATLUP2, LUP2 squalene-hopene cyclase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g43954 ATLUP2, LUP2 squalene-hopene cyclase & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c1_4750V3.1 LUP1, ATLUP1, Pp3c1_4750 lupeol synthase 1 0.04 OrthoFinder output from all 47 species
Ppi_g05657 No alias squalene-hopene cyclase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15284 ATLUP2, LUP2 squalene-hopene cyclase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15618 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004522 ATLUP2, LUP2 squalene-hopene cyclase & original description: CDS=1-2067 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007471 ATLUP2, LUP2 squalene-hopene cyclase & original description: CDS=1-2091 0.04 OrthoFinder output from all 47 species
Tin_g20996 ATLUP2, LUP2 squalene-hopene cyclase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR032697 SQ_cyclase_N 11 313
IPR032696 SQ_cyclase_C 330 601
No external refs found!