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  5. Mp2g14320.1

Mp2g14320.1


Description : Ubinuclein-1 OS=Arabidopsis thaliana (sp|q8rx78|ubn1_arath : 237.0)


Gene families : OG0002157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp2g14320.1

Target Alias Description ECC score Gene Family Method Actions
Ala_g08113 No alias component *(UBN) of HIRA chaperone complex & original... 0.02 OrthoFinder output from all 47 species
Ala_g10106 No alias component *(UBN) of HIRA chaperone complex & original... 0.02 OrthoFinder output from all 47 species
Aob_g03526 No alias component *(UBN) of HIRA chaperone complex & original... 0.02 OrthoFinder output from all 47 species
Dcu_g19398 No alias component *(UBN) of HIRA chaperone complex & original... 0.02 OrthoFinder output from all 47 species
Dcu_g32525 No alias component *(UBN) of HIRA chaperone complex & original... 0.06 OrthoFinder output from all 47 species
LOC_Os01g66050.1 LOC_Os01g66050 Ubinuclein-1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g23230 No alias component *(UBN) of HIRA chaperone complex & original... 0.03 OrthoFinder output from all 47 species
Nbi_g01371 No alias component *(UBN) of HIRA chaperone complex & original... 0.02 OrthoFinder output from all 47 species
Ore_g44164 No alias component *(UBN) of HIRA chaperone complex & original... 0.02 OrthoFinder output from all 47 species
Sam_g27050 No alias component *(UBN) of HIRA chaperone complex & original... 0.02 OrthoFinder output from all 47 species
Smo402260 No alias Ubinuclein-1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo440877 No alias Ubinuclein-2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc11g005130.2.1 Solyc11g005130 Ubinuclein-1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e019054_P001 Zm00001e019054 Ubinuclein-1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0080009 mRNA methylation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR014840 HRD 187 234
No external refs found!