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  5. Mp2g06220.1

Mp2g06220.1


Description : pre-mRNA-processing protein (LUC7)


Gene families : OG0003288 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003288_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp2g06220.1

Target Alias Description ECC score Gene Family Method Actions
AT5G51410 No alias LUC7 N_terminus domain-containing protein 0.04 OrthoFinder output from all 47 species
Adi_g043401 No alias pre-mRNA-processing protein *(LUC7) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g08504 No alias pre-mRNA-processing protein *(LUC7) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07158 No alias pre-mRNA-processing protein *(LUC7) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12469 No alias pre-mRNA-processing protein *(LUC7) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g05490 No alias pre-mRNA-processing protein *(LUC7) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g27300.2 LOC_Os07g27300 pre-mRNA-processing protein (LUC7) 0.06 OrthoFinder output from all 47 species
Nbi_g04227 No alias pre-mRNA-processing protein *(LUC7) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32313 No alias pre-mRNA-processing protein *(LUC7) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g02733 No alias pre-mRNA-processing protein *(LUC7) & original description: none 0.03 OrthoFinder output from all 47 species
Smo149618 No alias No description available 0.05 OrthoFinder output from all 47 species
Solyc03g093160.3.1 Solyc03g093160 pre-mRNA-processing protein (LUC7) 0.02 OrthoFinder output from all 47 species
Spa_g21308 No alias pre-mRNA-processing protein *(LUC7) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07127 No alias pre-mRNA-processing protein *(LUC7) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e033431_P001 Zm00001e033431 pre-mRNA-processing protein (LUC7) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEA Interproscan
CC GO:0005685 U1 snRNP IEA Interproscan
BP GO:0006376 mRNA splice site selection IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR004882 Luc7-rel 4 251
No external refs found!