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  5. Mp2g01020.1

Mp2g01020.1


Description : component RBL of COMPASS histone trimethylation complex


Gene families : OG0004928 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004928_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp2g01020.1

Target Alias Description ECC score Gene Family Method Actions
AT3G21060 No alias Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
Cre03.g195750 No alias Chromatin organisation.histone modifications.histone... 0.01 OrthoFinder output from all 47 species
Dcu_g25012 No alias component *(RBL/SWD1) of COMPASS histone trimethylation... 0.02 OrthoFinder output from all 47 species
GSVIVT01018295001 No alias Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
Lfl_g03233 No alias component *(RBL/SWD1) of COMPASS histone trimethylation... 0.02 OrthoFinder output from all 47 species
MA_826527g0010 No alias component RBL of COMPASS histone trimethylation complex 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020476 No alias component *(RBL/SWD1) of COMPASS histone trimethylation... 0.02 OrthoFinder output from all 47 species
Solyc01g096950.4.1 Solyc01g096950 component RBL of COMPASS histone trimethylation complex 0.02 OrthoFinder output from all 47 species
Tin_g11050 No alias component *(RBL/SWD1) of COMPASS histone trimethylation... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP HCCA
CC GO:0000445 THO complex part of transcription export complex IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 69 95
IPR001680 WD40_repeat 23 51
No external refs found!