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  5. Mp1g28520.1

Mp1g28520.1


Description : no hits & (original description: none)


Gene families : OG0003203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g28520.1
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00253930 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G23900 No alias RNA recognition motif (RRM)-containing protein 0.03 OrthoFinder output from all 47 species
Aev_g12192 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Ala_g18481 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Als_g03832 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.05 OrthoFinder output from all 47 species
Als_g28501 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Aop_g06645 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Cba_g27324 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Ceric.33G033500.1 Ceric.33G033500 component *(CWC21) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Dac_g01005 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Dcu_g46607 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Dde_g00853 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Ehy_g04929 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.06 OrthoFinder output from all 47 species
Ehy_g10000 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.05 OrthoFinder output from all 47 species
Len_g32499 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.05 OrthoFinder output from all 47 species
Lfl_g04122 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Pir_g15377 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.01 OrthoFinder output from all 47 species
Pnu_g23093 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24276 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017578 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Sam_g40738 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Solyc09g092250.3.1 Solyc09g092250 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Spa_g41651 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.05 OrthoFinder output from all 47 species
Tin_g01175 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Zm00001e017191_P001 Zm00001e017191 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e025611_P001 Zm00001e025611 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 290 352
IPR017868 Filamin/ABP280_repeat-like 71 169
No external refs found!