- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : YLS7, TBL17
Description : Protein YLS7 OS=Arabidopsis thaliana (sp|q9fhm0|tbl17_arath : 417.0)
Gene families : OG0000038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp1g28350.1 | |
| Cluster | HCCA: Cluster_18 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G31110 | TBL40 | Plant protein of unknown function (DUF828) | 0.03 | OrthoFinder output from all 47 species | |
| AT5G49340 | TBL4 | TRICHOME BIREFRINGENCE-LIKE 4 | 0.01 | OrthoFinder output from all 47 species | |
| Aev_g02218 | TBL25 | mannan O-acetyltransferase *(MOAT) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g12811 | YLS7, TBL17 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g27444 | TBL23 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g15307 | TBL27 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g06406 | TBL25 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g12377 | TBL16 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g21288 | TBL25 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene04677.t1 | TBL18, Aspi01Gene04677 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene04678.t1 | TBL18, Aspi01Gene04678 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene04692.t1 | TBL18, Aspi01Gene04692 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g008163 | TBL7 | not classified & original description: CDS=268-1311 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0056.g034028 | TBL12 | not classified & original description: CDS=97-897 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0111.g045700 | TBL25 | not classified & original description: CDS=1-1209 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0220.g058643 | TBL11 | not classified & original description: CDS=289-1827 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g05213 | TBL10 | rhamnogalacturonan-I O-acetyltransferase *(TBL) &... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g05722 | TBL25 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g08042 | TBL11 | rhamnogalacturonan-I O-acetyltransferase *(TBL) &... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g13761 | TBL18 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.14G025400.1 | TBL21, Ceric.14G025400 | not classified & original description: pacid=50634039... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.18G035700.1 | TBL21, Ceric.18G035700 | not classified & original description: pacid=50621838... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G036100.1 | TBL25, Ceric.18G036100 | not classified & original description: pacid=50621273... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.31G004600.1 | TBL23, Ceric.31G004600 | mannan O-acetyltransferase *(MOAT) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g20108 | TBL23 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g23310 | TBL16 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g38479 | TBL21 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g01695 | TBL25 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g14692 | TBL26 | mannan O-acetyltransferase *(MOAT) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g15838 | TBL16 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g01430 | TBL25 | mannan O-acetyltransferase *(MOAT) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g01472 | TBL11 | rhamnogalacturonan-I O-acetyltransferase *(TBL) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g24583 | TBL18 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01011180001 | TBL3 | Protein trichome birefringence-like 3 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01017904001 | TBL10 | Protein trichome birefringence-like 10 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01028123001 | TBL6 | Protein trichome birefringence-like 6 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01030284001 | TBL34 | RNA biosynthesis.transcriptional activation.AP2/ERF... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01032748001 | TBL33 | Protein trichome birefringence-like 33 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01035039001 | TBL4 | Protein trichome birefringence-like 4 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_09995 | TBR | Protein trichome birefringence OS=Arabidopsis thaliana... | 0.01 | OrthoFinder output from all 47 species | |
| Gb_26279 | TBL16 | Protein trichome birefringence-like 16 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g11810.1 | TBL38, LOC_Os01g11810 | Protein trichome birefringence-like 38 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g46350.1 | TBL38, LOC_Os01g46350 | Protein trichome birefringence-like 38 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g46410.1 | TBL21, LOC_Os01g46410 | Protein trichome birefringence-like 21 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g18110.1 | PMR5, TBL44,... | Protein PMR5 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g60340.1 | TBL33, LOC_Os03g60340 | xylan O-acetyltransferase (XOAT) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g28830.1 | TBL33, LOC_Os05g28830 | xylan O-acetyltransferase (XOAT) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g12840.1 | TBL27, LOC_Os06g12840 | Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g15320.1 | TBL27, LOC_Os07g15320 | Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g22743 | TBL5 | polysaccharide O-acetyltransferase *(TBR) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g34381 | TBL5 | polysaccharide O-acetyltransferase *(TBR) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g03917 | TBL18 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g08353 | TBL11 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g09350 | TBL13 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g02019 | TBL25 | mannan O-acetyltransferase *(MOAT) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g37893 | TBL13 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g03586 | TBL11 | rhamnogalacturonan-I O-acetyltransferase *(TBL) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g26243 | TBL2 | polysaccharide O-acetyltransferase *(TBR) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g51051 | TBL27 | xyloglucan O-acetyltransferase *(AXY4) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g11644 | TBL25 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g16905 | TBL21 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g29366 | TBL2 | polysaccharide O-acetyltransferase *(TBR) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g42867 | TBL21 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0029.g010000 | TBL24 | not classified & original description: CDS=164-1597 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0062.g015447 | TBL12 | not classified & original description: CDS=133-1434 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0077.g017620 | TBL26 | not classified & original description: CDS=671-2035 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25385 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g28029 | No alias | polysaccharide O-acetyltransferase *(TBR) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Smo404468 | TBL23 | Protein trichome birefringence-like 23 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g082940.3.1 | TBL34, Solyc02g082940 | xylan O-acetyltransferase (XOAT) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g096030.3.1 | ESK1, TBL29,... | xylan O-acetyltransferase (XOAT) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g082070.3.1 | PMR5, TBL44,... | Protein PMR5 OS=Arabidopsis thaliana... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc07g053330.2.1 | TBL3, Solyc07g053330 | xylan O-acetyltransferase (XOAT) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g055780.3.1 | TBL43, Solyc07g055780 | Protein trichome birefringence-like 43 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g007450.2.1 | TBL42, Solyc10g007450 | Protein trichome birefringence-like 42 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g22187 | TBL27 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e001317_P001 | ESK1, TBL29,... | xylan O-acetyltransferase (XOAT) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015716_P001 | TBL20, Zm00001e015716 | Protein trichome birefringence-like 20 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e016007_P001 | TBR, Zm00001e016007 | Protein trichome birefringence OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e019393_P001 | ESK1, TBL29,... | xylan O-acetyltransferase (XOAT) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e020298_P002 | TBL19, Zm00001e020298 | Protein trichome birefringence-like 19 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e030880_P002 | TBL22, Zm00001e030880 | Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e030881_P001 | TBL27, Zm00001e030881 | Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e030883_P001 | TBL27, Zm00001e030883 | Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e036072_P001 | TBL27, Zm00001e036072 | Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e036802_P001 | TBL21, Zm00001e036802 | Protein trichome birefringence-like 19 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e036803_P001 | TBL19, Zm00001e036803 | Protein trichome birefringence-like 19 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006486 | protein glycosylation | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity | IEP | HCCA |
| MF | GO:0008373 | sialyltransferase activity | IEP | HCCA |
| MF | GO:0008417 | fucosyltransferase activity | IEP | HCCA |
| MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0031127 | alpha-(1,2)-fucosyltransferase activity | IEP | HCCA |
| BP | GO:0042546 | cell wall biogenesis | IEP | HCCA |
| BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
| BP | GO:0070085 | glycosylation | IEP | HCCA |
| No external refs found! |