Mp1g27500.1 (SCY2, EMB2289)

Aliases : SCY2, EMB2289

Description : component SecY2 of inner envelope Sec2 post-import insertion system

Gene families : OG0005693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005693_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp1g27500.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00025p00237300	SCY2, EMB2289,...	Protein translocation.chloroplast.inner envelope Sec2...	0.02	OrthoFinder output from all 47 species
Als_g17456	SCY2, EMB2289	component *(SecY2) of inner envelope Sec2 post-import...	0.02	OrthoFinder output from all 47 species
Azfi_s0032.g024822	SCY2, EMB2289	component *(SecY2) of inner envelope Sec2 post-import...	0.03	OrthoFinder output from all 47 species
Ceric.25G055200.1	SCY2, EMB2289,...	component *(SecY2) of inner envelope Sec2 post-import...	0.02	OrthoFinder output from all 47 species
Cre03.g158250	SCY2, EMB2289	No description available	0.03	OrthoFinder output from all 47 species
Dcu_g39950	SCY2, EMB2289	component *(SecY2) of inner envelope Sec2 post-import...	0.02	OrthoFinder output from all 47 species
GSVIVT01011128001	SCY2, EMB2289	Protein translocation.chloroplast.inner envelope Sec2...	0.02	OrthoFinder output from all 47 species
LOC_Os05g33020.1	SCY2, EMB2289,...	component SecY2 of inner envelope Sec2 post-import...	0.03	OrthoFinder output from all 47 species
MA_10435989g0010	SCY2, EMB2289	Preprotein translocase subunit SCY2, chloroplastic...	0.01	OrthoFinder output from all 47 species
MA_502892g0010	SCY2, EMB2289	Preprotein translocase subunit SCY2, chloroplastic...	0.02	OrthoFinder output from all 47 species
Ore_g29035	SCY2, EMB2289	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g27421	No alias	component *(SecY2) of inner envelope Sec2 post-import...	0.02	OrthoFinder output from all 47 species
Smo180624	SCY2, EMB2289	Protein translocation.chloroplast.inner envelope Sec2...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000105	histidine biosynthetic process	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
BP	GO:0006547	histidine metabolic process	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0030258	lipid modification	IEP	HCCA
BP	GO:0030259	lipid glycosylation	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002208	SecY/SEC61-alpha	200	546

External Links

No external refs found!

Mp1g27500.1 (SCY2, EMB2289)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation