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  5. Mp1g25060.1

Mp1g25060.1


Description : histone demethylase (JMJD6). transcription factor (JUMONJI)


Gene families : OG0001583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001583_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g25060.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g056023 No alias histone demethylase *(JMJD6) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0033.g025062 No alias histone demethylase *(JMJD6) & original description: CDS=158-1753 0.02 OrthoFinder output from all 47 species
Dcu_g01221 No alias histone demethylase *(JMJD6) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g31722 No alias histone demethylase *(JMJD6) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e024420_P001 Zm00001e024420 histone demethylase (JMJD6). transcription factor (JUMONJI) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 80 120
IPR041667 Cupin_8 193 412
No external refs found!